Factsheet for Solyc02g088060.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003602	Potato	peroxisome	76.49	25.33
Solyc07g005040.2.1	Tomato	cytosol, plasma membrane	25.83	19.95
Solyc06g071100.2.1	Tomato	nucleus, plastid	55.96	17.68
Solyc03g113400.2.1	Tomato	nucleus	55.96	17.68
Zm00001d007775_P001	Maize	peroxisome	38.74	17.67
GSMUA_Achr4P22300_001	Banana	plasma membrane	54.3	17.17
GSMUA_Achr4P22290_001	Banana	plasma membrane	52.98	16.97
EER96010	Sorghum	cytosol, peroxisome, plasma membrane	53.31	16.84
GSMUA_Achr9P10970_001	Banana	cytosol, peroxisome, plasma membrane	52.98	16.75
Os12t0638700-01	Rice	plasma membrane	52.65	16.63
KXG37819	Sorghum	peroxisome	52.32	16.56
Zm00001d041214_P003	Maize	plasma membrane	52.32	16.53
EES16456	Sorghum	cytosol, peroxisome, plasma membrane	52.32	16.53
TraesCS5D01G013100.2	Wheat	golgi	52.32	16.49
TraesCS4A01G283100.2	Wheat	nucleus	52.32	16.48
Os03t0689300-01	Rice	plasma membrane	51.66	16.32
HORVU4Hr1G004820.7	Barley	peroxisome	51.66	16.22
Os07t0191200-01	Rice	plasma membrane	51.32	16.2
TraesCS4D01G027900.1	Wheat	peroxisome	51.32	16.2
TraesCS5A01G004200.1	Wheat	golgi, unclear	51.32	16.18
TraesCS5A01G004300.2	Wheat	cytosol, peroxisome, plasma membrane	50.99	16.13
Zm00001d033552_P003	Maize	peroxisome	50.66	16.04
Solyc08g078200.1.1	Tomato	plastid	50.99	15.94
TraesCSU01G073200.3	Wheat	plasma membrane	51.66	15.76
TraesCS4B01G031000.1	Wheat	plasma membrane	48.01	15.73
Solyc07g017780.2.1	Tomato	nucleus, unclear	49.67	15.54
Solyc12g010360.1.1	Tomato	plasma membrane	47.35	15.48
Solyc03g117150.2.1	Tomato	unclear	47.68	15.09
HORVU5Hr1G000780.15	Barley	golgi, mitochondrion, plasma membrane	49.34	14.99
Zm00001d019062_P005	Maize	plasma membrane	40.73	13.85
TraesCS4A01G282900.1	Wheat	plasma membrane	38.74	13.6
Solyc02g011700.1.1	Tomato	extracellular	3.31	9.01
Zm00001d021000_P008	Maize	cytosol, peroxisome, plasma membrane	10.93	7.05

Protein Annotations

EnsemblPlants:Solyc02g088060.1.1	EnsemblPlantsGene:Solyc02g088060.1	Gene3D:2.70.150.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PANTHER:PTHR42861	PANTHER:PTHR42861:SF11
PFAM:PF00122	PFAM:PF00690	SEG:seg	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	UniParc:UPI00027682FA	UniProt:K4BBW2	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2:-:50263246..50264320

Molecular Weight (calculated)

34028.1 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.242

Length

302 amino acids

Sequence
(BLAST)

001: MTHLIKSLTH VCLDYGSDQR VLMDLDDLEN IPIEQVCENL RCKEDEGLTY TDVEERLSIY GHNKLEEKTE SKFFNFLRYS RNPLSRTMVA AAIMAMAIVR
101: KASRLVPFLE KWCRVLIRGQ WCEVNSSNLV PGDMIRIKMG DIVPADVRIL KYCTTDDPVV KIDQSDLTVR TRYRNAAAAH LVKKFQPSAE QANLEVSSDT
201: EQSVHSVIDT FADKVLHSIT VAIQEVPHGG KEKSGSPWQF IGVLPFVDPP REDCASSIRE LLNHGVNVKM ITRDQLVIGK EIGRRVGMGT NMYPSSALLG
301: HN

Best Arabidopsis Sequence Match ( AT3G47950.1 )
(BLAST)

001: MTTTVEDNRE VLEAVLKEAV DLENVPIEEV FENLRCSKEG LTTQAADERL ALFGHNKLEE KKESKFLKFL GFMWNPLSWV MEAAAIMAIA LANGGGKPPD
101: WQDFVGIITL LVINSTISFI EENNAGNAAA ALMARLAPKA KVLRDGRWGE QDAAILVPGD IISIKLGDIV PADARLLEGD PLKIDQSALT GESLPVTKSS
201: GDGVYSGSTC KQGEIEAVVI ATGVHTFFGK AAHLVDTTNQ IGHFQQVLTA IGNFCICSIA VGMLIEIVVM YPIQHRAYRP GIDNLLVLLI GGIPIAMPTV
301: LSVTMAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNKLTVD KNLIEVFMKG VDADTVVLMA ARASRLENQD AIDAAIVGML ADPKDARAGI
401: QEVHFLPFNP TDKRTALTYI DNEGNTHRVS KGAPEQILNL AHNKSEIERR VHAVIDKFAE RGLRSLAVAY QDVPEGRKDS AGGPWQFVGL MPLFDPPRHD
501: SAETIRRALN LGVSVKMITG DQLAIGKETG RRLGMGTNMY PSSALLGQNK DESIVALPVD ELIEKADGFA GVFPEHKYEI VKRLQARKHI CGMTGDGVND
601: APALKKADIG IAVADATDAA RSASDIVLTE PGLSVIISAV LTSRAIFQRM KNYTIYAVSI TIRIVLGFML LALIWQFDFP PFMVLIIAIL NDGTIMTISK
701: DRVKPSPLPD SWKLSEIFAT GVVFGSYMAM MTVIFFWVSY KTDFFPRTFG VATLEKTAHD DFRKLASAIY LQVSIISQAL IFVTRSRSWS FVERPGIFLM
801: IAFILAQLVA TLIAVYANWS FAAIEGIGWG WAGVIWLYNI IFYIPLDFIK FFIRYALSGR AWDLVIEQRV AFTRQKDFGK EQRELQWAHA QRTLHGLQAP
901: DTKMFTDRTH VSELNQMAEE AKRRAEIARL RELHTLKGHV ESVVRLKGLD IETIQQAYTV

Arabidopsis Description

AHA4Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VFQ4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.