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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH02845 Soybean endoplasmic reticulum 98.52 98.11
KRH12255 Soybean endoplasmic reticulum 93.47 92.88
VIT_11s0052g00620.t01 Wine grape extracellular 90.52 90.04
KRH16128 Soybean endoplasmic reticulum, mitochondrion, nucleus 89.25 89.06
KRH04967 Soybean plasma membrane 88.94 88.75
KRH61927 Soybean endoplasmic reticulum, mitochondrion 88.3 88.12
KRH52590 Soybean cytosol, peroxisome, plasma membrane 88.09 87.91
KRH37283 Soybean plasma membrane 93.36 87.12
KRH47385 Soybean endoplasmic reticulum 85.35 85.35
KRH44521 Soybean endoplasmic reticulum 84.62 84.62
KRH09668 Soybean endoplasmic reticulum 83.98 83.98
KRH23631 Soybean plasma membrane 83.77 83.77
KRH16408 Soybean cytosol, extracellular, plasma membrane 16.23 81.91
KRH20096 Soybean endoplasmic reticulum, mitochondrion 81.66 81.84
KRH56972 Soybean cytosol, peroxisome, plasma membrane 82.09 81.57
KRH18509 Soybean endoplasmic reticulum 76.19 81.42
KRH03539 Soybean endoplasmic reticulum 81.14 81.31
KRH03407 Soybean endoplasmic reticulum 81.66 81.15
KRH54497 Soybean endoplasmic reticulum, extracellular, mitochondrion, nucleus 81.56 80.96
KRH63412 Soybean endoplasmic reticulum 81.35 80.75
KRG93484 Soybean extracellular 80.08 79.5
KRH12960 Soybean endoplasmic reticulum 71.97 79.23
KRH68997 Soybean plasma membrane 75.34 76.55
KRH66539 Soybean peroxisome, plasma membrane 75.97 76.54
KRH48806 Soybean endoplasmic reticulum 76.5 75.62
KRH16612 Soybean peroxisome 20.23 59.26
KRH52592 Soybean extracellular, plasma membrane 4.43 57.53
KRH16357 Soybean cytosol 7.8 38.54
KRH43127 Soybean plasma membrane 17.6 22.21
KRH59277 Soybean mitochondrion 20.65 20.31
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10MapMan:24.1.2.3.1Gene3D:3.40.1110.10EMBL:ACUP02008163EMBL:ACUP02008164
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfncoils:Coil
EnsemblPlantsGene:GLYMA_13G097900GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006139GO:GO:0006754
GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0008553GO:GO:0009058
GO:GO:0009987GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0046872GO:GO:0120029GO:GO:1902600InterPro:HAD-like_sfUniProt:I1LVP7InterPro:IPR023299
EnsemblPlants:KRH19045ProteinID:KRH19045ProteinID:KRH19045.1InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00690
PFAM:PF00702PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF41
InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01647TMHMM:TMhelixUniParc:UPI0002957488SEG:seg::
Description
hypothetical protein
Coordinates
chr13:+:21316825..21325904
Molecular Weight (calculated)
104414.0 Da
IEP (calculated)
6.684
GRAVY (calculated)
0.088
Length
949 amino acids
Sequence
(BLAST)
001: MAADKAAISL EEIKNETVDL ERIPIEEVFQ QLKCTREGLS SDEGANRLQI FGPNKLEEKK ESKFLKFLGF MWNPLSWVME AAAVMAIALA NGDGKPPDWQ
101: DFVGIVCLLV INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGKWTEEE AAILVPGDII SIKLGDIIPA DARLLEGDPL KVDQSALTGE SLPVTRGPGE
201: EVFSGSTCKQ GEIEAVVIAT GVHTFFGKAA HLVDSTNQVG HFQKVLTAIG NFCICSIAVG MLAEIIVMYP IQHRKYRDGI DNLLVLLIGG IPIAMPTVLS
301: VTMAIGSHRL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLSVDKN LIEVFAKGVE KDHVILLAAR ASRTENQDAI DAAIVGMLAD PKEARAGVRE
401: VHFLPFNPVD KRTALTYIDA DGNWHRASKG APEQIMTLCN LRDDAKRKVH AIIDKFAERG LRSLAVARQE VPEKTKESAG APWQFVGLLS LFDPPRHDSA
501: ETIPRALHLG VNVKMILGSI QETGRRLGMG TNMYPSASLL GQDKDASIAA LPVEELIEKA DGFAGVFPEH KYEIVKKLQE RKHICGMTGD GVNDAPALKK
601: ADIGIAVADA TDAARSASDI VLTEPGLSVI ISAVLTSRAI FQRMKNYTIY AVSITIRIVF GFMFIALIWK FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PLPDSWKLQE IFATGIVLGS YLALMTVIFF WAMKETDFFP DKFGVRHLSH DEMMSALYLQ VSIVSQALIF VTRSRSWSFI ERPGMLLVCA FVIAQLIATI
801: IAVYADWGFA KVKGIGWGWA GVIWLYSIVF YIPLDVMKFA TRYVLSGKAW VNMLENKTAF TTKKDYGKEE REAQWAHAQR TLHGLQPPET SGIFNEKNSY
901: RELSEIAEQA KRRAEVARLR ELHTLKGHVE SVVKLKGLDI DTIQQHYTV
Best Arabidopsis Sequence Match ( AT5G57350.1 )
(BLAST)
001: MASGLEDIVN ENVDLEKIPI EEVFQQLKCS REGLSGAEGE NRLQIFGPNK LEEKKESKLL KFLGFMWNPL SWVMEAAAIM AIALANGGGK PPDWQDFVGI
101: VCLLVINSTI SFVEENNAGN AAAALMAGLA PKTKVLRDGK WSEQEASILV PGDIVSIKLG DIIPADARLL EGDPLKVDQS ALTGESLPAT KGPGEEVFSG
201: STCKQGEIEA VVIATGVHTF FGKAAHLVDS TNQVGHFQKV LTAIGNFCIC SIAVGIAIEI VVMYPIQRRH YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI
301: GSHKLSQQGA ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL SVDKNLIEVY CKGVEKDEVL LFAARASRVE NQDAIDAAMV GMLADPKEAR AGIREIHFLP
401: FNPVDKRTAL TFIDSNGNWH RVSKGAPEQI LDLCNARADL RKRVHSTIDK YAERGLRSLA VSRQTVPEKT KESSGSPWEF VGVLPLFDPP RHDSAETIRR
501: ALDLGVNVKM ITGDQLAIAK ETGRRLGMGS NMYPSSSLLG KHKDEAMAHI PVEDLIEKAD GFAGVFPEHK YEIVKKLQER KHICGMTGDG VNDAPALKKA
601: DIGIAVADAT DAARGASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRIVFG FMLIALIWKF DFSPFMVLII AILNDGTIMT ISKDRVKPSP
701: TPDSWKLKEI FATGVVLGGY MAIMTVVFFW AAYKTDFFPR TFHVRDLRGS EHEMMSALYL QVSIVSQALI FVTRSRSWSF TERPGYFLLI AFWVAQLIAT
801: AIAVYGNWEF ARIKGIGWGW AGVIWLYSIV FYFPLDIMKF AIRYILAGTA WKNIIDNRTA FTTKQNYGIE EREAQWAHAQ RTLHGLQNTE TANVVPERGG
901: YRELSEIANQ AKRRAEIARL RELHTLKGHV ESVVKLKGLD IETAGHYTV
Arabidopsis Description
AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.