CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19045	Soybean	endoplasmic reticulum	98.11	98.52
KRH12255	Soybean	endoplasmic reticulum	94.23	94.03
VIT_11s0052g00620.t01	Wine grape	extracellular	91.4	91.3
KRH16128	Soybean	endoplasmic reticulum, mitochondrion, nucleus	89.82	90.01
KRH04967	Soybean	plasma membrane	89.51	89.7
KRH61927	Soybean	endoplasmic reticulum, mitochondrion	88.77	88.96
KRH52590	Soybean	cytosol, peroxisome, plasma membrane	88.56	88.75
KRH37283	Soybean	plasma membrane	94.12	88.2
KRH47385	Soybean	endoplasmic reticulum	86.15	86.51
KRH44521	Soybean	endoplasmic reticulum	85.2	85.56
KRH09668	Soybean	endoplasmic reticulum	84.58	84.93
KRH23631	Soybean	plasma membrane	84.37	84.72
KRH20096	Soybean	endoplasmic reticulum, mitochondrion	82.16	82.68
KRH16408	Soybean	cytosol, extracellular, plasma membrane	16.26	82.45
KRH56972	Soybean	cytosol, peroxisome, plasma membrane	82.58	82.41
KRH18509	Soybean	endoplasmic reticulum	76.71	82.32
KRH03539	Soybean	endoplasmic reticulum	81.53	82.05
KRH03407	Soybean	endoplasmic reticulum	82.16	81.99
KRH54497	Soybean	endoplasmic reticulum, extracellular, mitochondrion, nucleus	81.85	81.59
KRH63412	Soybean	endoplasmic reticulum	81.64	81.38
KRG93484	Soybean	extracellular	80.59	80.33
KRH12960	Soybean	endoplasmic reticulum	72.4	80.05
KRH66539	Soybean	peroxisome, plasma membrane	76.5	77.39
KRH68997	Soybean	plasma membrane	75.76	77.3
KRH48806	Soybean	endoplasmic reticulum	77.02	76.46
KRH16612	Soybean	peroxisome	20.46	60.19
KRH52592	Soybean	extracellular, plasma membrane	4.41	57.53
KRH16357	Soybean	cytosol	7.87	39.06
KRH43127	Soybean	plasma membrane	17.84	22.61
KRH59277	Soybean	mitochondrion	20.78	20.52

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	EntrezGene:100816905	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02010328	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ncoils:Coil	EnsemblPlantsGene:GLYMA_17G061800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553
GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	InterPro:HAD_sf
UniProt:I1MSP4	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH02845	ProteinID:KRH02845	ProteinID:KRH02845.1
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI000233E4DC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:4707867..4715299

Molecular Weight (calculated)

104868.0 Da

IEP (calculated)

6.862

GRAVY (calculated)

0.085

Length

953 amino acids

Sequence
(BLAST)

001: MAADKAAISL EEIKNETVDL ERIPIEEVFQ QLKCTREGLS SDEGANRLQI FGPNKLEEKK ESKFLKFLGF MWNPLSWVME AAAIMAIALA NGNGKPPDWQ
101: DFVGIVCLLV INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGKWTEEE AAILVPGDII SIKLGDIIPA DARLLEGDPL KVDQSALTGE SLPVTRGPGE
201: EVFSGSTCKQ GEIEAVVIAT GVHTFFGKAA HLVDSTNQVG HFQKVLTAIG NFCICSIAVG MLAEIIVMYP IQHRKYRDGI DNLLVLLIGG IPIAMPTVLS
301: VTMAIGSHRL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLSVDKN LIEVFAKGVE KDHVILLAAR ASRTENQDAI DAAIVGMLAD PKEARAGVRE
401: VHFLPFNPVD KRTALTYIDA DGNWHRASKG APEQIMTLCN LRDDAKKKVH AIIDKFAERG LRSLAVARQE VPEKTKESAG APWQFVGLLS LFDPPRHDSA
501: ETIRRALHLG VNVKMITGDQ LAIAKETGRR LGMGTNMYPS ASLLGQDKDA SIAALPVEEL IEKADGFAGV FPEHKYEIVK KLQERKHICG MTGDGVNDAP
601: ALKKADIGIA VADATDAARG ASDIVLTEPG LSVIISAVLT SRAIFQRMKN YTIYAVSITI RIVFGFMFIA LIWKFDFSPF MVLIIAILND GTIMTISKDR
701: VKPSPLPDSW KLQEIFATGI VLGSYLALMT VIFFWAMKET DFFPDKFGVR HLTHDEMMSA LYLQVSIVSQ ALIFVTRSRS WSFIERPGLL LVFAFVIAQL
801: IATIIAVYAD WGFAKVKGIG WGWAGVIWLY SVVFYIPLDV MKFATRYILS GKAWVNMLEN KTAFTTKKDY GKEEREAQWA HAQRTLHGLQ PPETSGIFNE
901: KNSYRELSEI AEQAKRRAEV ARLRELHTLK GHVESVVKLK GLDIDTIQQH YTV

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.