Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039228.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 10.19 | 32.35 |
| CDY34800 | Canola | endoplasmic reticulum, plasma membrane, plastid | 9.88 | 32.32 |
| CDY35173 | Canola | cytosol | 26.23 | 26.48 |
| CDY09517 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 15.74 | 25.89 |
| CDX96220 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 15.43 | 22.52 |
| CDY39222 | Canola | plasma membrane | 15.74 | 21.98 |
| KRH16612 | Soybean | peroxisome | 21.3 | 21.3 |
| TraesCS1A01G258300.1 | Wheat | peroxisome | 42.9 | 14.52 |
| TraesCS4A01G282900.1 | Wheat | plasma membrane | 32.72 | 12.33 |
| TraesCS7A01G510800.1 | Wheat | plasma membrane | 34.26 | 11.7 |
| TraesCS2A01G502400.1 | Wheat | golgi | 34.26 | 11.67 |
| TraesCS7A01G145400.1 | Wheat | peroxisome | 33.64 | 11.52 |
| TraesCS6A01G360500.1 | Wheat | peroxisome | 33.64 | 11.51 |
| TraesCS5A01G543300.1 | Wheat | peroxisome | 34.26 | 11.38 |
| TraesCS5A01G004300.2 | Wheat | cytosol, peroxisome, plasma membrane | 33.33 | 11.31 |
| TraesCS5A01G004200.1 | Wheat | golgi, unclear | 33.33 | 11.27 |
| TraesCS4A01G005000.2 | Wheat | unclear | 32.41 | 11.25 |
| TraesCS4A01G283100.2 | Wheat | nucleus | 32.72 | 11.05 |
| VIT_00s2844g00010.t01 | Wine grape | cytosol | 3.09 | 6.25 |
| Zm00001d029535_P001 | Maize | cytosol, plasma membrane, plastid | 0.93 | 1.72 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G247800.1 | EnsemblPlantsGene:TraesCS4A01G247800 | Gene3D:1.20.1110.10 | InterPro:ATPase_P-typ_TM_dom_sf | PANTHER:PTHR42861 | PANTHER:PTHR42861:SF34 |
| SEG:seg | SUPFAM:SSF81665 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:+:558667947..558669694
Molecular Weight (calculated)
36524.7 Da
IEP (calculated)
8.464
GRAVY (calculated)
-0.361
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNAGSTAPT RNPPTVCAAR GGVRGRERQA RRVGLPGALR EGGRGQEEEV GEEQDAKGDL RERHGGREGQ YGGGTQCVEL LDGEENYQNQ EREGAKLLAD
101: DDMRLTTCFL HPLGVGFGSV LGSRLKTKTM VILVMKQHHI FPRGVAEGEL FYVVNVLDLP GVHKYPYSSG VYPDRTDLEV RFLAVYDPAH CHSQRRVKPS
201: PHPDSWKLPE IFITGIIYGA YLAVKAVVFF FAMTSTDFFS EKFHVRSLRG NKDAMMSALY LQVSIISQAL IFVTRSRRWC FQERPGLWLC FAFVVAQIVS
301: QYRRRTEQIN DKDGVDTLHE CRSF
101: DDMRLTTCFL HPLGVGFGSV LGSRLKTKTM VILVMKQHHI FPRGVAEGEL FYVVNVLDLP GVHKYPYSSG VYPDRTDLEV RFLAVYDPAH CHSQRRVKPS
201: PHPDSWKLPE IFITGIIYGA YLAVKAVVFF FAMTSTDFFS EKFHVRSLRG NKDAMMSALY LQVSIISQAL IFVTRSRRWC FQERPGLWLC FAFVVAQIVS
301: QYRRRTEQIN DKDGVDTLHE CRSF
001: MYPIQRRHYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS HKLSQQGAIT KRMTAIEEMA GMDVLCSDKT GTLTLNKLSV DKNLIEVYCK GVEKDEVLLF
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV
Arabidopsis Description
AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [golgi,plasma membrane,mitochondrion,cytosol]
SUBAcon: [golgi,plasma membrane,mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.