Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62141 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 13.92 | 4.85 |
| CDX96220 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 12.66 | 4.5 |
| CDY39222 | Canola | plasma membrane | 12.66 | 4.31 |
| CDY69631 | Canola | cytosol, peroxisome, plasma membrane | 27.85 | 4.2 |
| CDY67606 | Canola | peroxisome | 26.58 | 4.14 |
| CDY09517 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 10.13 | 4.06 |
| CDY34800 | Canola | endoplasmic reticulum, plasma membrane, plastid | 5.06 | 4.04 |
| CDY03545 | Canola | plastid | 31.65 | 3.79 |
| CDX79363 | Canola | plasma membrane | 40.51 | 3.7 |
| CDY45757 | Canola | peroxisome | 44.3 | 3.64 |
| CDX76810 | Canola | plasma membrane | 39.24 | 3.63 |
| CDY50939 | Canola | peroxisome | 43.04 | 3.58 |
| CDX93092 | Canola | peroxisome | 43.04 | 3.58 |
| CDY34767 | Canola | peroxisome | 43.04 | 3.56 |
| CDY39956 | Canola | plasma membrane | 37.97 | 3.48 |
| CDX87330 | Canola | plasma membrane | 37.97 | 3.48 |
| CDY28167 | Canola | peroxisome | 41.77 | 3.48 |
| CDY64741 | Canola | peroxisome | 41.77 | 3.48 |
| CDY30294 | Canola | peroxisome | 41.77 | 3.48 |
| CDX82608 | Canola | peroxisome | 41.77 | 3.48 |
| CDY30730 | Canola | plasma membrane | 34.18 | 3.43 |
| CDY42692 | Canola | peroxisome | 40.51 | 3.41 |
| CDY56993 | Canola | peroxisome | 40.51 | 3.38 |
| CDY38294 | Canola | peroxisome | 40.51 | 3.36 |
| CDY25913 | Canola | peroxisome | 40.51 | 3.36 |
| CDX67957 | Canola | peroxisome | 37.97 | 3.35 |
| CDY56511 | Canola | peroxisome | 37.97 | 3.34 |
| CDY51651 | Canola | plasma membrane | 37.97 | 3.34 |
| CDY41176 | Canola | peroxisome | 40.51 | 3.33 |
| CDY14186 | Canola | plasma membrane | 39.24 | 3.3 |
| CDY51650 | Canola | plasma membrane | 37.97 | 3.3 |
| CDX72217 | Canola | peroxisome | 37.97 | 3.3 |
| CDY67153 | Canola | peroxisome | 37.97 | 3.27 |
| CDY47940 | Canola | peroxisome | 39.24 | 3.26 |
| CDY42259 | Canola | peroxisome | 39.24 | 3.26 |
| CDX71820 | Canola | peroxisome | 39.24 | 3.23 |
| CDX72218 | Canola | peroxisome | 36.71 | 3.18 |
| CDY08915 | Canola | plasma membrane | 11.39 | 3.18 |
| CDY35173 | Canola | cytosol | 12.66 | 3.12 |
| CDY62140 | Canola | peroxisome | 26.58 | 3.06 |
| CDX83917 | Canola | plasma membrane | 35.44 | 2.97 |
| CDX96779 | Canola | plasma membrane | 35.44 | 2.97 |
| CDY14177 | Canola | extracellular | 8.86 | 2.78 |
| KRH52592 | Soybean | extracellular, plasma membrane | 2.53 | 2.74 |
| CDX91747 | Canola | plasma membrane | 6.33 | 2.36 |
| CDY13569 | Canola | cytosol | 2.53 | 2.33 |
| CDY33128 | Canola | plastid | 6.33 | 2.26 |
| CDY09377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 6.33 | 2.24 |
| CDX76840 | Canola | plasma membrane | 3.8 | 2.19 |
| CDY24136 | Canola | mitochondrion | 6.33 | 2.12 |
| CDX76809 | Canola | cytosol, nucleus, peroxisome | 3.8 | 1.96 |
| CDY50206 | Canola | endoplasmic reticulum | 5.06 | 1.9 |
| CDY28277 | Canola | cytosol | 2.53 | 1.85 |
| CDY45679 | Canola | cytosol, golgi, plastid | 3.8 | 1.33 |
| CDY26756 | Canola | mitochondrion | 3.8 | 1.29 |
| CDY45897 | Canola | extracellular | 1.27 | 1.09 |
| CDY31231 | Canola | plastid | 2.53 | 1.01 |
Protein Annotations
| EnsemblPlants:CDX98252 | EnsemblPlantsGene:GSBRNA2T00105765001 | ProteinID:CDX98252 | ProteinID:CDX98252.1 | UniParc:UPI0004EE7BF9 | MapMan:35.2 |
Description
BnaC06g16130D
Coordinates
chrLK031904:+:36184..36611
Molecular Weight (calculated)
8988.7 Da
IEP (calculated)
10.619
GRAVY (calculated)
-0.672
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MGTCSKDTSR LVAKRSCYTE LSESAEQAKR RTEIARQYKP LSQLRKLHTH WGHVESVVGL VTKSWTIASE ARNSSRQIL
001: MASGLEDIVN ENVDLEKIPI EEVFQQLKCS REGLSGAEGE NRLQIFGPNK LEEKKESKLL KFLGFMWNPL SWVMEAAAIM AIALANGGGK PPDWQDFVGI
101: VCLLVINSTI SFVEENNAGN AAAALMAGLA PKTKVLRDGK WSEQEASILV PGDIVSIKLG DIIPADARLL EGDPLKVDQS ALTGESLPAT KGPGEEVFSG
201: STCKQGEIEA VVIATGVHTF FGKAAHLVDS TNQVGHFQKV LTAIGNFCIC SIAVGIAIEI VVMYPIQRRH YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI
301: GSHKLSQQGA ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL SVDKNLIEVY CKGVEKDEVL LFAARASRVE NQDAIDAAMV GMLADPKEAR AGIREIHFLP
401: FNPVDKRTAL TFIDSNGNWH RVSKGAPEQI LDLCNARADL RKRVHSTIDK YAERGLRSLA VSRQTVPEKT KESSGSPWEF VGVLPLFDPP RHDSAETIRR
501: ALDLGVNVKM ITGDQLAIAK ETGRRLGMGS NMYPSSSLLG KHKDEAMAHI PVEDLIEKAD GFAGVFPEHK YEIVKKLQER KHICGMTGDG VNDAPALKKA
601: DIGIAVADAT DAARGASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRIVFG FMLIALIWKF DFSPFMVLII AILNDGTIMT ISKDRVKPSP
701: TPDSWKLKEI FATGVVLGGY MAIMTVVFFW AAYKTDFFPR TFHVRDLRGS EHEMMSALYL QVSIVSQALI FVTRSRSWSF TERPGYFLLI AFWVAQLIAT
801: AIAVYGNWEF ARIKGIGWGW AGVIWLYSIV FYFPLDIMKF AIRYILAGTA WKNIIDNRTA FTTKQNYGIE EREAQWAHAQ RTLHGLQNTE TANVVPERGG
901: YRELSEIANQ AKRRAEIARL RELHTLKGHV ESVVKLKGLD IETAGHYTV
101: VCLLVINSTI SFVEENNAGN AAAALMAGLA PKTKVLRDGK WSEQEASILV PGDIVSIKLG DIIPADARLL EGDPLKVDQS ALTGESLPAT KGPGEEVFSG
201: STCKQGEIEA VVIATGVHTF FGKAAHLVDS TNQVGHFQKV LTAIGNFCIC SIAVGIAIEI VVMYPIQRRH YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI
301: GSHKLSQQGA ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL SVDKNLIEVY CKGVEKDEVL LFAARASRVE NQDAIDAAMV GMLADPKEAR AGIREIHFLP
401: FNPVDKRTAL TFIDSNGNWH RVSKGAPEQI LDLCNARADL RKRVHSTIDK YAERGLRSLA VSRQTVPEKT KESSGSPWEF VGVLPLFDPP RHDSAETIRR
501: ALDLGVNVKM ITGDQLAIAK ETGRRLGMGS NMYPSSSLLG KHKDEAMAHI PVEDLIEKAD GFAGVFPEHK YEIVKKLQER KHICGMTGDG VNDAPALKKA
601: DIGIAVADAT DAARGASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRIVFG FMLIALIWKF DFSPFMVLII AILNDGTIMT ISKDRVKPSP
701: TPDSWKLKEI FATGVVLGGY MAIMTVVFFW AAYKTDFFPR TFHVRDLRGS EHEMMSALYL QVSIVSQALI FVTRSRSWSF TERPGYFLLI AFWVAQLIAT
801: AIAVYGNWEF ARIKGIGWGW AGVIWLYSIV FYFPLDIMKF AIRYILAGTA WKNIIDNRTA FTTKQNYGIE EREAQWAHAQ RTLHGLQNTE TANVVPERGG
901: YRELSEIANQ AKRRAEIARL RELHTLKGHV ESVVKLKGLD IETAGHYTV
Arabidopsis Description
AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.