CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45897	Canola	extracellular	27.36	63.04
CDY08915	Canola	plasma membrane	53.77	40.28
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	17.92	38.38
CDX76840	Canola	plasma membrane	22.64	35.04
CDY14177	Canola	extracellular	34.91	29.37
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.94	27.92
CDY35173	Canola	cytosol	41.98	27.73
CDY03545	Canola	plastid	84.91	27.27
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.94	24.77
CDY39222	Canola	plasma membrane	26.42	24.14
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.0	23.35
CDY30730	Canola	plasma membrane	75.94	20.46
CDX82608	Canola	peroxisome	87.74	19.6
CDY64741	Canola	peroxisome	87.26	19.49
CDY30294	Canola	peroxisome	87.26	19.49
CDY14186	Canola	plasma membrane	85.85	19.38
CDY28167	Canola	peroxisome	85.38	19.09
CDY39956	Canola	plasma membrane	75.47	18.58
CDX87330	Canola	plasma membrane	75.0	18.47
CDX79363	Canola	plasma membrane	75.0	18.4
CDX76810	Canola	plasma membrane	73.58	18.27
CDX67957	Canola	peroxisome	75.94	17.99
CDX93092	Canola	peroxisome	79.25	17.7
CDY50939	Canola	peroxisome	78.77	17.6
CDY38294	Canola	peroxisome	77.83	17.33
CDY25913	Canola	peroxisome	77.83	17.33
CDY42259	Canola	peroxisome	77.36	17.25
CDY47940	Canola	peroxisome	77.36	17.25
CDY42692	Canola	peroxisome	74.06	16.74
CDY45757	Canola	peroxisome	75.94	16.74
CDY56993	Canola	peroxisome	74.06	16.58
CDY41176	Canola	peroxisome	75.0	16.55
CDX71820	Canola	peroxisome	75.0	16.55
CDY67153	Canola	peroxisome	71.23	16.45
CDX83917	Canola	plasma membrane	73.11	16.42
CDY34767	Canola	peroxisome	73.58	16.32
CDX96779	Canola	plasma membrane	72.64	16.31
CDY51651	Canola	plasma membrane	66.51	15.68
CDY51650	Canola	plasma membrane	66.98	15.6
CDX72217	Canola	peroxisome	66.51	15.49
CDX72218	Canola	peroxisome	66.51	15.48
CDY56511	Canola	peroxisome	63.21	14.94
CDY62140	Canola	peroxisome	36.79	11.37
CDY13569	Canola	cytosol	3.77	9.3
CDY45679	Canola	cytosol, golgi, plastid	8.96	8.44
CDY28277	Canola	cytosol	3.77	7.41
CDY33128	Canola	plastid	6.6	6.33
CDX98252	Canola	nucleus	2.36	6.33
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	2.83	2.69
CDY26756	Canola	mitochondrion	2.83	2.59
CDY31231	Canola	plastid	0.94	1.01
CDY50206	Canola	endoplasmic reticulum	0.47	0.48
CDY24136	Canola	mitochondrion	0.47	0.42
CDX76809	Canola	cytosol, nucleus, peroxisome	0.0	0.0
CDY67606	Canola	peroxisome	0.0	0.0
CDY69631	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
KRH52592	Soybean	extracellular, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDX91747	EnsemblPlantsGene:GSBRNA2T00153262001	Gene3D:1.20.1110.10	GO:A0A078DS56	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:HAD-like_sf	InterPro:P_typ_ATPase	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19
PRINTS:PR00119	PRINTS:PR00120	ProteinID:CDX91747	ProteinID:CDX91747.1	SUPFAM:SSF56784	SUPFAM:SSF81665
TMHMM:TMhelix	UniParc:UPI0004EE5BF1	MapMan:24.1.2.3.1	:	:	:

Description

BnaC08g06660D

Coordinates

chrLK031869:+:778841..779918

Molecular Weight (calculated)

23373.1 Da

IEP (calculated)

9.116

GRAVY (calculated)

0.567

Length

212 amino acids

Sequence
(BLAST)

001: MTGDGVNDAP ALKKADIGID VADATDAARG ASDIVLTEPG LSVIICVVLT SRAIFQRMKN YTIYAVSITI RIVFGFMLIA LIWEFVFSAF MVLIIGILND
101: GTIMTISKDR VKPSPTPDSW KLKEIFATGI VLGDKYCLRK LKFIIDMQDK FGVKSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA
201: FVIAQLVSLI GR

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.