CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72217	Canola	peroxisome	99.23	99.23
CDY51651	Canola	plasma membrane	96.81	98.0
CDX72218	Canola	peroxisome	97.47	97.37
Bra024101.1-P	Field mustard	plasma membrane	95.27	95.8
CDY67153	Canola	peroxisome	94.18	93.36
CDY28167	Canola	peroxisome	94.18	90.4
CDY14186	Canola	plasma membrane	91.54	88.71
CDY64741	Canola	peroxisome	91.43	87.67
CDY30294	Canola	peroxisome	91.32	87.57
CDX82608	Canola	peroxisome	91.1	87.36
AT4G30190.2	Thale cress	peroxisome	92.86	86.14
CDY03545	Canola	plastid	62.09	85.61
CDY62140	Canola	peroxisome	63.52	84.26
CDY56511	Canola	peroxisome	81.87	83.05
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	86.04	82.25
CDY25913	Canola	peroxisome	85.49	81.72
CDY47940	Canola	peroxisome	85.27	81.6
CDY42259	Canola	peroxisome	85.27	81.6
CDY38294	Canola	peroxisome	85.27	81.51
CDY69631	Canola	cytosol, peroxisome, plasma membrane	46.92	81.49
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	84.84	81.18
TraesCS2B01G530500.1	Wheat	peroxisome	84.62	80.97
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	84.62	80.97
CDY67606	Canola	peroxisome	45.05	80.87
TraesCS2A01G502400.1	Wheat	golgi	84.4	80.76
Os04t0656100-01	Rice	plasma membrane	84.07	80.44
CDY50939	Canola	peroxisome	82.97	79.56
CDX93092	Canola	peroxisome	82.86	79.45
CDY39956	Canola	plasma membrane	74.4	78.63
CDX87330	Canola	plasma membrane	74.18	78.4
CDX79363	Canola	plasma membrane	73.41	77.31
CDY45897	Canola	extracellular	7.8	77.17
CDX67957	Canola	peroxisome	75.6	76.87
CDY45757	Canola	peroxisome	81.1	76.72
HORVU2Hr1G111640.2	Barley	plasma membrane	84.4	76.04
CDY30730	Canola	plasma membrane	64.62	74.71
CDY34767	Canola	peroxisome	78.02	74.27
CDX76810	Canola	plasma membrane	67.36	71.78
CDY41176	Canola	peroxisome	74.07	70.14
CDX76809	Canola	cytosol, nucleus, peroxisome	11.76	69.93
CDX71820	Canola	peroxisome	73.85	69.93
CDY56993	Canola	peroxisome	71.98	69.17
CDY42692	Canola	peroxisome	70.99	68.87
CDX96779	Canola	plasma membrane	70.11	67.58
CDX83917	Canola	plasma membrane	70.0	67.48
CDX91747	Canola	plasma membrane	15.6	66.98
CDY14177	Canola	extracellular	17.25	62.3
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	15.27	61.23
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	12.2	56.35
CDY08915	Canola	plasma membrane	16.48	53.0
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	12.53	51.35
CDY39222	Canola	plasma membrane	12.64	49.57
CDX76840	Canola	plasma membrane	7.36	48.91
CDY35173	Canola	cytosol	17.14	48.6
CDY28277	Canola	cytosol	5.27	44.44
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	4.73	43.43
CDX98252	Canola	nucleus	3.3	37.97
CDY24136	Canola	mitochondrion	9.34	36.02
CDY45679	Canola	cytosol, golgi, plastid	8.68	35.11
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	8.35	34.08
CDY13569	Canola	cytosol	2.64	27.91
CDY26756	Canola	mitochondrion	6.92	27.16
CDY33128	Canola	plastid	6.48	26.7
CDY31231	Canola	plastid	5.6	25.76
CDY50206	Canola	endoplasmic reticulum	4.51	19.52

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	GO:A0A078IKS4	UniProt:A0A078IKS4
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY51650
ProteinID:CDY51650	ProteinID:CDY51650.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152
GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00003979001
InterPro:HAD-like_sf	InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647
TMHMM:TMhelix	UniParc:UPI0004EDE274	SEG:seg	:	:	:

Description

BnaAnng10900DPlasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078IKS4]

Coordinates

chrLK033016:-:35073..40637

Molecular Weight (calculated)

99935.1 Da

IEP (calculated)

6.872

GRAVY (calculated)

0.103

Length

910 amino acids

Sequence
(BLAST)

001: MGLEDIKNET VDLEKIPIEE VFQQLKCTKE GLTTQEGEAR VQIFGLNKLE EKKESKILKF LGFMWNPLSW VMEAAAIMAI ALANGDGRPP DWQDFVGIIC
101: LLVINSTISF IEENNAGNAA AALMAGLAPK TKVLRDGKWS EQEAAILVPG DIVSIKLGDI IPADARLLEG DPLKVDQSAL TGESLPVTKH PGQGVFSGST
201: CKQGEIEAVV IATGVHTFFG KAAHLVDSTN QVGHFQKVLT AIGNFCICSI AIGMVIEIIV MYPIQRRKYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS
301: HKLSQQGAIT KRMTAIEELA GMDVLCSDKT GTLTLNKLSV DKNLVEVFCK GVEKDQVLLF AAMASRIENQ DAIDAAMVGM LSDPKEARAG IREVHFLPFN
401: PTDKRTALTY IDSSGNWHRV SKGAPEQILE LCKASNDLSK RVLDIIEKYA ERGLRSLAVS RQTVPEKTKE SLGSRWEFVG LLPLFDPPRH DSAETIRRAL
501: HLGVNVKMIT GDQLAIGKET GRRLGMGTNM YPSSALLGNH KDPALANIPV EDLIEQADGF AGVFPEHKYE IVKKLQERKH IVGMTGDGVN DAPALKKADI
601: GIAVDDATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVLGFM LIALIWKFDF SAFMVLIIAI LNDGTIMTIS KDRVKPSPTP
701: DSWKLREIFA TGVVLGSYLA VMTVVFFWLA HETDFFSNLF GVRSIKALLM IAFLIAQLVA TLIAVYANWE FAEVKGIGWG WAGVIWLYSI ITYFPLDVIK
801: FAIRYTLTGK AWLNMFESRT ALTTKKDFGK EEREAQWAVA QRTLHGLQPK EPVNIIPEKG GYRELSEIAE QAKKRAEIAR LRELHTLKGH VESVAKLKGL
901: DIETPGHYTV

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.