CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96609
EER96610
EES11577

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	EES11577	AT2G18960.1	12182706
AT2G18960.1	EER96609	AT4G27500.1	12182706
AT2G18960.1	EER96610	AT4G27500.1	12182706
AT2G18960.1	EER96609	AT4G27500.1	16279950
AT2G18960.1	EER96610	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0656100-01	Rice	plasma membrane	96.0	96.0
Zm00001d026490_P010	Maize	peroxisome	98.32	95.21
TraesCS2B01G530500.1	Wheat	peroxisome	92.11	92.11
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	92.11	92.11
TraesCS2A01G502400.1	Wheat	golgi	91.48	91.48
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	88.22	88.13
AT2G18960.1	Thale cress	peroxisome	86.12	86.3
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.91	86.27
CDY03545	Canola	plastid	59.83	86.21
CDX82608	Canola	peroxisome	86.01	86.2
CDY30294	Canola	peroxisome	85.91	86.09
Bra010299.1-P	Field mustard	plasma membrane	84.96	86.05
CDY14186	Canola	plasma membrane	84.96	86.05
HORVU2Hr1G111640.2	Barley	plasma membrane	91.38	86.04
CDY64741	Canola	peroxisome	85.8	85.99
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.7	85.88
Bra011172.1-P	Field mustard	peroxisome	85.17	85.44
CDY28167	Canola	peroxisome	85.17	85.44
CDY67153	Canola	peroxisome	82.33	85.29
CDY51650	Canola	plasma membrane	81.18	84.84
Bra024101.1-P	Field mustard	plasma membrane	80.65	84.75
CDY51651	Canola	plasma membrane	80.02	84.65
CDX72218	Canola	peroxisome	80.97	84.52
AT5G57350.1	Thale cress	peroxisome	84.33	84.51
CDX72217	Canola	peroxisome	80.86	84.51
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	84.12	84.39
AT4G30190.2	Thale cress	peroxisome	86.86	84.2
CDY42259	Canola	peroxisome	84.02	84.02
CDY47940	Canola	peroxisome	84.02	84.02
CDY25913	Canola	peroxisome	83.91	83.82
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.81	83.72
CDY38294	Canola	peroxisome	83.6	83.51
Bra020447.1-P	Field mustard	plasma membrane	60.15	83.26
EES16456	Sorghum	cytosol, peroxisome, plasma membrane	83.28	82.85
Zm00001d002006_P013	Maize	peroxisome	66.04	82.2
KXG37819	Sorghum	peroxisome	82.02	81.76
Bra024452.1-P	Field mustard	cytosol, peroxisome, plasma membrane	81.18	81.35
EER96010	Sorghum	cytosol, peroxisome, plasma membrane	81.6	81.17
EES13591	Sorghum	cytosol, peroxisome, plasma membrane	81.07	80.9
KRH16408	Soybean	cytosol, extracellular, plasma membrane	15.98	80.85
CDY62140	Canola	peroxisome	57.83	80.17
EER88725	Sorghum	peroxisome	80.34	80.17
OQU75967	Sorghum	plasma membrane	72.03	79.93
EES05959	Sorghum	cytosol, peroxisome, plasma membrane	79.81	79.81
CDY56511	Canola	peroxisome	74.03	78.48
KXG34177	Sorghum	peroxisome	78.13	78.05
EER92929	Sorghum	cytosol, peroxisome, plasma membrane	78.34	77.69
VIT_19s0090g00010.t01	Wine grape	mitochondrion	5.68	77.14
CDY45897	Canola	extracellular	7.26	75.0
KXG30075	Sorghum	cytosol	2.73	72.22
KXG40431	Sorghum	plasma membrane	74.03	70.12
KXG40033	Sorghum	peroxisome	69.3	68.79
CDY14177	Canola	extracellular	17.56	66.27
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	15.67	65.64
AT4G11730.1	Thale cress	peroxisome	54.57	63.84
GSMUA_Achr7P19560_001	Banana	nucleus	15.25	58.0
VIT_02s0012g00950.t01	Wine grape	plastid	13.67	55.32
Solyc02g011700.1.1	Tomato	extracellular	5.57	47.75
CDY28277	Canola	cytosol	4.84	42.59
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	22.82	38.34
OQU78858	Sorghum	cytosol	8.62	34.45
KXG40399	Sorghum	plasma membrane	29.97	31.99
CDY13569	Canola	cytosol	2.73	30.23
CDY33128	Canola	plastid	6.94	29.86

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	EntrezGene:8079609	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	UniProt:C5Y9I0	ncoils:Coil
EnsemblPlants:EES11577	ProteinID:EES11577	ProteinID:EES11577.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152
GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf
InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	InterPro:P_typ_ATPase	SMART:SM00831
EnsemblPlantsGene:SORBI_3006G247100	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	unigene:Sbi.4725	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI0001A871E4	RefSeq:XP_002447249.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:58615897..58622789

Molecular Weight (calculated)

104831.0 Da

IEP (calculated)

6.666

GRAVY (calculated)

0.073

Length

951 amino acids

Sequence
(BLAST)

001: MGGLEEIKNE AVDLENIPIE EVFEQLKCTR EGLSSSEGQQ RLEIFGPNKL EEKKESKILK FLGFMWNPLS WVMEMAAIMA IALANGGGKP PDWEDFVGII
101: VLLVINSTIS FIEENNAGNA AAALMANLAP KTKVLRDGRW GEQEAAILVP GDIISIKLGD IVPADARLLE GDPLKVDQSA LTGESLPVTR GPGDEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQQVL TAIGNFCICS IAVGIIVEII VMFPIQHRKY RSGIENLLVL LIGGIPIAMP TVLSVTMAIG
301: SHKLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVDKDHVLL LAARASRTEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGDGNWHR VSKGAPEQIL DLCHCKEDLR RKVHGIIDKY AERGLRSLAV ARQEVPEKNK ESPGGPWQFV GLLPLFDPPR HDSAETIRKA
501: LVLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGQ NKDSTLEALP VDELIEKADG FAGVFPEHKY EIVKRLQEKK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARSASDIVL TEPGLSVIIS AVLTSRCIFQ RMKNYTIYAV SITIRIVLGF MLIALIWKYD FSPFMVLIIA ILNDGTIMTI SKDRVKPSPL
701: PDSWKLKEIF ATGIVLGSYL AIMTVIFFWA MHKTDFFSDK FGVRSIRDSE HEMMSALYLQ VSIVSQALIF VTRSRSWSFV ERPGLLLVTA FLLAQLVATF
801: LAVYANWGFA RIKGIGWGWA GVVWLYSIVF YFPLDLIKFF IRFVLSGRAW DNLLENKTAF TTKKDYGREE REAQWATAQR TLHGLQPPEA ATNTLFNDKS
901: SYRELSEIAE QAKRRAEIAR LRELNTLKGH VESVVKLKGL DIDTIQQNYT V

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.