Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96010 | Sorghum | cytosol, peroxisome, plasma membrane | 34.87 | 8.68 |
| EES05959 | Sorghum | cytosol, peroxisome, plasma membrane | 34.45 | 8.62 |
| EES11577 | Sorghum | cytosol, peroxisome, plasma membrane | 34.45 | 8.62 |
| EER88725 | Sorghum | peroxisome | 34.45 | 8.6 |
| KXG34177 | Sorghum | peroxisome | 34.03 | 8.51 |
| EES13591 | Sorghum | cytosol, peroxisome, plasma membrane | 34.03 | 8.5 |
| EER92929 | Sorghum | cytosol, peroxisome, plasma membrane | 34.03 | 8.45 |
| KXG37819 | Sorghum | peroxisome | 33.61 | 8.39 |
| EES16456 | Sorghum | cytosol, peroxisome, plasma membrane | 33.61 | 8.37 |
| OQU75967 | Sorghum | plasma membrane | 29.83 | 8.28 |
| KXG40431 | Sorghum | plasma membrane | 33.61 | 7.97 |
| KXG40033 | Sorghum | peroxisome | 31.51 | 7.83 |
| VIT_00s0760g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 4.2 | 5.95 |
| KXG40399 | Sorghum | plasma membrane | 18.49 | 4.94 |
| CDY45679 | Canola | cytosol, golgi, plastid | 3.78 | 4.0 |
| Zm00001d019796_P001 | Maize | plasma membrane | 1.68 | 3.42 |
| KXG30075 | Sorghum | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:OQU78858 | EnsemblPlantsGene:SORBI_3008G061801 | Gene3D:1.20.1110.10 | PANTHER:PTHR42861 | PANTHER:PTHR42861:SF17 | ProteinID:OQU78858 |
| ProteinID:OQU78858.1 | SEG:seg | UniParc:UPI000B8BB0E5 | UniProt:A0A1Z5R4Z7 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr8:-:6571272..6573489
Molecular Weight (calculated)
26169.1 Da
IEP (calculated)
11.552
GRAVY (calculated)
-0.547
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLADCDAPQ AVFGVQSIKE NDRELMAALY LQVSIISQAL IFVTRSRSWS FVERPGFLLL FAAQAAGGDV HRGVRQLGLL PHAGDRLGVG RRHLDLQHRH
101: LHPARRAQVH DPRRAQRQGR GQQRPEQVIR VVVLVSRGDG VHEQGLRQEG EREAQWAVEQ RTHSTGLNQL ATSSELTEQA SQGRKTCGAA DTQEARRVGG
201: EASRRGSASI PFRRATPCDR RRPAVAGGGE SCVLRSFP
101: LHPARRAQVH DPRRAQRQGR GQQRPEQVIR VVVLVSRGDG VHEQGLRQEG EREAQWAVEQ RTHSTGLNQL ATSSELTEQA SQGRKTCGAA DTQEARRVGG
201: EASRRGSASI PFRRATPCDR RRPAVAGGGE SCVLRSFP
001: MATEFSWDEI KKENVDLERI PVEEVFEQLK CSKEGLSSDE GAKRLEIFGA NKLEEKSENK FLKFLGFMWN PLSWVMESAA IMAIVLANGG GKAPDWQDFI
101: GIMVLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GKWGEQEASI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP TTKHPGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTSIGNFC ICSIGLGMLI EILIMYPIQH RTYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLSVDKSLIE VFPKNMDSDS VVLMAARASR IENQDAIDAS IVGMLGDPKE ARAGITEVHF
401: LPFNPVDKRT AITYIDESGD WHRSSKGAPE QIIELCNLQG ETKRKAHEVI DGFAERGLRS LGVAQQTVPE KTKESDGSPW EFVGLLPLFD PPRHDSAETI
501: RRALELGVNV KMITGDQLAI GIETGRRLGM GTNMYPSTSL LGNSKDESLV GIPIDELIEK ADGFAGVFPE HKYEIVKKLQ ERKHICGMTG DGVNDAPALK
601: KADIGIAVAD ATDAARSASD IVLTEPGLSV IISAVLTSRA IFQRMKNYTI YAVSITIRIV LGFMLVALIW RFDFAPFMVL IIAILNDGTI MTISKDRVKP
701: SPVPDSWKLN EIFATGVVLG TYMALTTVLF FWLAHDTDFF SKTFGVRSIQ GNEEELMAAL YLQVSIISQA LIFVTRSRSW SFVERPGFLL LIAFVIAQLV
801: ATLIAVYANW GFARIVGCGW GWAGGIWVYS IITYIPLDIL KFIIRYALTG KAWDNMINQK TAFTTKKDYG KGEREAQWAL AQRTLHGLPP PEAMFNDNKN
901: ELSEIAEQAK RRAEVARLRE LHTLKGHVES VVKLKGLDID TIQQHYTV
101: GIMVLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GKWGEQEASI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP TTKHPGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTSIGNFC ICSIGLGMLI EILIMYPIQH RTYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLSVDKSLIE VFPKNMDSDS VVLMAARASR IENQDAIDAS IVGMLGDPKE ARAGITEVHF
401: LPFNPVDKRT AITYIDESGD WHRSSKGAPE QIIELCNLQG ETKRKAHEVI DGFAERGLRS LGVAQQTVPE KTKESDGSPW EFVGLLPLFD PPRHDSAETI
501: RRALELGVNV KMITGDQLAI GIETGRRLGM GTNMYPSTSL LGNSKDESLV GIPIDELIEK ADGFAGVFPE HKYEIVKKLQ ERKHICGMTG DGVNDAPALK
601: KADIGIAVAD ATDAARSASD IVLTEPGLSV IISAVLTSRA IFQRMKNYTI YAVSITIRIV LGFMLVALIW RFDFAPFMVL IIAILNDGTI MTISKDRVKP
701: SPVPDSWKLN EIFATGVVLG TYMALTTVLF FWLAHDTDFF SKTFGVRSIQ GNEEELMAAL YLQVSIISQA LIFVTRSRSW SFVERPGFLL LIAFVIAQLV
801: ATLIAVYANW GFARIVGCGW GWAGGIWVYS IITYIPLDIL KFIIRYALTG KAWDNMINQK TAFTTKKDYG KGEREAQWAL AQRTLHGLPP PEAMFNDNKN
901: ELSEIAEQAK RRAEVARLRE LHTLKGHVES VVKLKGLDID TIQQHYTV
Arabidopsis Description
AHA8ATPase 8, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9M2A0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.