Factsheet for Bra024452.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010401.1-P
Bra019045.1-P
Bra024452.1-P
Bra026343.1-P
Bra038835.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	Bra024452.1-P	AT2G18960.1	12182706
AT2G18960.1	Bra038835.1-P	AT2G18960.1	12182706
AT2G18960.1	Bra010401.1-P	AT4G27500.1	12182706
AT2G18960.1	Bra019045.1-P	AT4G27500.1	12182706
AT2G18960.1	Bra026343.1-P	AT4G27500.1	12182706
AT2G18960.1	Bra010401.1-P	AT4G27500.1	16279950
AT2G18960.1	Bra019045.1-P	AT4G27500.1	16279950
AT2G18960.1	Bra026343.1-P	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	22.76	95.15
CDY56511	Canola	peroxisome	89.67	94.87
CDY62140	Canola	peroxisome	67.23	93.0
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	92.2	92.2
AT2G18960.1	Thale cress	peroxisome	91.68	91.68
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	88.72	88.91
Bra010299.1-P	Field mustard	plasma membrane	87.78	88.71
Bra011172.1-P	Field mustard	peroxisome	88.2	88.29
Bra024101.1-P	Field mustard	plasma membrane	82.93	86.96
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	86.09	86.18
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	84.51	84.24
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	82.72	82.46
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	81.35	81.18
Os04t0656100-01	Rice	plasma membrane	80.82	80.65
Bra020447.1-P	Field mustard	plasma membrane	58.17	80.35
TraesCS2B01G530500.1	Wheat	peroxisome	80.3	80.13
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	80.3	80.13
TraesCS2A01G502400.1	Wheat	golgi	79.77	79.6
Bra003576.1-P	Field mustard	plasma membrane	71.02	78.92
Bra008288.1-P	Field mustard	cytosol, peroxisome, plasma membrane	78.82	78.9
Bra013168.1-P	Field mustard	peroxisome	78.61	78.61
VIT_19s0090g00010.t01	Wine grape	mitochondrion	5.8	78.57
Bra035163.1-P	Field mustard	plasma membrane	74.92	78.39
HORVU2Hr1G111640.2	Barley	plasma membrane	79.98	75.15
KRH16408	Soybean	cytosol, extracellular, plasma membrane	14.86	75.0
Bra007845.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.34	74.79
Bra007524.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.18	71.28
Bra014496.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.18	70.33
Bra016610.1-P	Field mustard	plasma membrane	69.13	69.49
Bra029249.1-P	Field mustard	plastid	77.66	62.83
GSMUA_Achr7P19560_001	Banana	nucleus	15.7	59.6
Bra039228.1-P	Field mustard	endoplasmic reticulum, plasma membrane	6.22	57.84
VIT_02s0012g00950.t01	Wine grape	plastid	12.86	51.91
Zm00001d027407_P003	Maize	cytosol	6.85	51.18
Solyc02g011700.1.1	Tomato	extracellular	5.48	46.85
Bra039509.1-P	Field mustard	cytosol, mitochondrion	7.17	40.0
Zm00001d027603_P001	Maize	plasma membrane	14.54	38.02
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	21.39	35.87
Zm00001d045237_P004	Maize	cytosol	4.95	34.81
Zm00001d013197_P002	Maize	plastid	17.18	28.9
Zm00001d033487_P001	Maize	plastid	16.75	27.8

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra024452	EnsemblPlants:Bra024452.1
EnsemblPlants:Bra024452.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553
GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	InterPro:IPR023299
UniProt:M4E6P8	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix
UniParc:UPI000253EF1F	SEG:seg	:	:	:	:

Description

AT2G18960 (E=0.0) AHA1, PMA, OST2 | AHA1 (ARABIDOPSIS H+ ATPASE 1); ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism / protein binding

Coordinates

chrA06:-:15864391..15870980

Molecular Weight (calculated)

104217.0 Da

IEP (calculated)

6.687

GRAVY (calculated)

0.063

Length

949 amino acids

Sequence
(BLAST)

001: MSGLENIKNE NVDLEKIPIE EVFQQLKCTS EGLTTQEGED RIQLFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVYSGS
201: TCKQGEIEAV VIATGVRTFF GKAAHLVDSP NQVGHFQKVL SSIGTFCICS IATGMVIEII VMYGIQKRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEL AGMDVLCSDK TGTLTLNKLS VDKDLVEVFC RGVEKGQVLL FAAMASRIEN QDAIDAAMVN MLGDPREARA GIKEVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPALR QKALATINNY AERGLRSLAV ARQLVPEKTK ESSGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DRDSNIASVP IEELIEKADG FAGVFPEHKY EIVKKLQEMK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLNEIF ATGIVLGGYQ AVMSVIFFWV IHKTDFCSDK FGVRSIRDNN DELMSAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA RVKGIGWGWA AVIWVYSILT YIPQDILKFA IRYILSGKAW VSMFDKRTAL TARRDYGAGE RQAEWATEQR TQHGLQTRQE VNVFPENGGY
901: RELSQIVEQA KKRAEIARLR EIHTFKGHVE SVAKQKGLDI DTSGHHYTL

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.