Factsheet for Zm00001d033487_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005636_P001
Zm00001d013197_P002
Zm00001d020175_P002
Zm00001d027407_P003
Zm00001d027603_P001
Zm00001d033487_P001
Zm00001d045237_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	Zm00001d013197_P002	AT2G18960.1	12182706
AT2G18960.1	Zm00001d027407_P003	AT2G18960.1	12182706
AT2G18960.1	Zm00001d027603_P001	AT2G18960.1	12182706
AT2G18960.1	Zm00001d033487_P001	AT2G18960.1	12182706
AT2G18960.1	Zm00001d045237_P004	AT2G18960.1	12182706
AT2G18960.1	Zm00001d005636_P001	AT4G27500.1	12182706
AT2G18960.1	Zm00001d020175_P002	AT4G27500.1	12182706
AT2G18960.1	Zm00001d005636_P001	AT4G27500.1	16279950
AT2G18960.1	Zm00001d020175_P002	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013197_P002	Maize	plastid	94.76	96.1
Zm00001d027407_P003	Maize	cytosol	8.04	36.22
Zm00001d029535_P001	Maize	cytosol, plasma membrane, plastid	6.12	20.11
Zm00001d045122_P001	Maize	plasma membrane	23.08	17.69
AT2G18960.1	Thale cress	peroxisome	29.2	17.6
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.2	17.6
Bra010299.1-P	Field mustard	plasma membrane	28.67	17.47
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	29.02	17.44
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.85	17.42
Bra011172.1-P	Field mustard	peroxisome	28.85	17.41
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.85	17.33
Zm00001d026490_P010	Maize	peroxisome	29.72	17.31
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.67	17.3
Bra020447.1-P	Field mustard	plasma membrane	20.63	17.18
AT5G57350.1	Thale cress	peroxisome	28.5	17.18
Zm00001d041214_P003	Maize	plasma membrane	28.67	17.15
Zm00001d002006_P013	Maize	peroxisome	22.9	17.15
AT4G30190.2	Thale cress	peroxisome	29.02	16.92
Zm00001d052022_P002	Maize	plasma membrane	27.45	16.83
Zm00001d033552_P003	Maize	peroxisome	27.97	16.77
Bra024452.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.8	16.75
Zm00001d027265_P007	Maize	plasma membrane	26.75	16.74
Bra024101.1-P	Field mustard	plasma membrane	26.4	16.69
Zm00001d019062_P005	Maize	plasma membrane	25.7	16.55
Zm00001d050214_P001	Maize	plasma membrane	26.92	16.21
Zm00001d027490_P002	Maize	plasma membrane	26.05	15.55
Zm00001d014347_P002	Maize	cytosol	5.24	15.23
AT4G11730.1	Thale cress	peroxisome	20.63	14.51
Zm00001d036728_P001	Maize	cytosol	17.83	14.35
Zm00001d019796_P001	Maize	plasma membrane	2.62	12.82
Zm00001d019307_P001	Maize	cytosol	2.1	11.21
Zm00001d046560_P001	Maize	cytosol, peroxisome, plasma membrane	13.11	11.14
Zm00001d007775_P001	Maize	peroxisome	12.06	10.42
Zm00001d045237_P004	Maize	cytosol	2.45	10.37
Zm00001d021000_P008	Maize	cytosol, peroxisome, plasma membrane	7.87	9.62
Zm00001d035826_P001	Maize	peroxisome, plasma membrane, plastid, vacuole	2.62	7.94
Zm00001d027304_P026	Maize	plasma membrane	12.06	7.74
Zm00001d027603_P001	Maize	plasma membrane	3.32	5.23

Protein Annotations

EnsemblPlants:Zm00001d033487_P001	EnsemblPlants:Zm00001d033487_T001	EnsemblPlantsGene:Zm00001d033487	Gene3D:3.40.1110.10	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:IPR023299	InterPro:P-loop_NTPase	PANTHER:PTHR42861
PANTHER:PTHR42861:SF19	ProteinID:ONM07677.1	SEG:seg	SUPFAM:SSF52540	UniParc:UPI000842DF19	UniProt:A0A1D6KZ73
MapMan:35.1	:	:	:	:	:

Description

ATPase 4 plasma membrane-type

Coordinates

chr1:-:264044317..264049434

Molecular Weight (calculated)

61541.9 Da

IEP (calculated)

9.721

GRAVY (calculated)

-0.312

Length

572 amino acids

Sequence
(BLAST)

001: MPHRTPATAS SLRMREPPAQ PAATPTHAAV PTPAAKPPPR PLHESRARIP PCDAATAHPP ATTSPITLAP LNLIEVSKAS KRKAAATAES GGKAVVEFLL
101: SSSATVAANK VANDIAALKL SGCTCTGVLT SHPFSHDIHG TSDAVRQYLW LFEQHNVMEI LIIAGSTCSS SQCQSARLYS ARSAVEHTTS GVQSFHSVGE
201: NIFDKIATRG ISIAMSHSQR FGFLGPNGLG KTTLINMREI LILWQELKQT QKPLKQNKRC KINRSNPIAE MKPPKIMRNQ SFDLCSPIAT SDGATPVASM
301: GARKDGQLGN LLKAPKLLDT STKTENQDTF DTAMDGMLAD PKEAMTGIRE IHFLPFNPID NRTALTYIDA DGNYTVSARV LLNSKINRSN PIVEMKPPKI
401: MRNQSFDLCS PIATSDGATP VASMGARKDG QLGNLLKAPK LLDTSTKTEN QDTFDTAMDG MLADPKEAMT GIREIHFLPF NPIDNRTALT YIDADGNYTV
501: SARVLLNSKI NRSNPIAEMK PPKIMRNQSF DLCSPIATSD GATPVASMGA RKDGQLGNLL KALKLLDTST KS

Best Arabidopsis Sequence Match ( AT2G18960.2 )
(BLAST)

001: MWNPLSWVME AAALMAIALA NGDNRPPDWQ DFVGIICLLV INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGKWSEQE AAILVPGDIV SIKLGDIIPA
101: DARLLEGDPL KVDQSALTGE SLPVTKHPGQ EVFSGSTCKQ GEIEAVVIAT GVHTFFGKAA HLVDSTNQVG HFQKVLTSIG NFCICSIAIG IAIEIVVMYP
201: IQHRKYRDGI DNLLVLLIGG IPIAMPTVLS VTMAIGSHRL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLSVDKN LVEVFCKGVE KDQVLLFAAM
301: ASRVENQDAI DAAMVGMLAD PKEARAGIRE VHFLPFNPVD KRTALTYIDS DGNWHRVSKG APEQILDLAN ARPDLRKKVL SCIDKYAERG LRSLAVARQV
401: VPEKTKESPG GPWEFVGLLP LFDPPRHDSA ETIRRALNLG VNVKMITGDQ LAIGKETGRR LGMGTNMYPS AALLGTDKDS NIASIPVEEL IEKADGFAGV
501: FPEHKYEIVK KLQERKHIVG MTGDGVNDAP ALKKADIGIA VADATDAARG ASDIVLTEPG LSVIISAVLT SRAIFQRMKN YTIYAVSITI RIVFGFMLIA
601: LIWEFDFSAF MVLIIAILND GTIMTISKDR VKPSPTPDSW KLKEIFATGI VLGGYQAIMS VIFFWAAHKT DFFSDKFGVR SIRDNNDELM GAVYLQVSII
701: SQALIFVTRS RSWSFVERPG ALLMIAFVIA QLVATLIAVY ADWTFAKVKG IGWGWAGVIW IYSIVTYFPQ DILKFAIRYI LSGKAWASLF DNRTAFTTKK
801: DYGIGEREAQ WAQAQRTLHG LQPKEDVNIF PEKGSYRELS EIAEQAKRRA EIARLRELHT LKGHVESVAK LKGLDIDTAG HHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.