Factsheet for Zm00001d005636_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013197_P002
Zm00001d027407_P003
Zm00001d027603_P001
Zm00001d033487_P001
Zm00001d045237_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27500.1	Zm00001d013197_P002	AT2G18960.1	12182706
AT4G27500.1	Zm00001d027407_P003	AT2G18960.1	12182706
AT4G27500.1	Zm00001d027603_P001	AT2G18960.1	12182706
AT4G27500.1	Zm00001d033487_P001	AT2G18960.1	12182706
AT4G27500.1	Zm00001d045237_P004	AT2G18960.1	12182706
AT4G27500.1	Zm00001d013197_P002	AT2G18960.1	16279950
AT4G27500.1	Zm00001d027407_P003	AT2G18960.1	16279950
AT4G27500.1	Zm00001d027603_P001	AT2G18960.1	16279950
AT4G27500.1	Zm00001d033487_P001	AT2G18960.1	16279950
AT4G27500.1	Zm00001d045237_P004	AT2G18960.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96610	Sorghum	nucleus	92.06	92.06
Zm00001d020175_P002	Maize	golgi, plasma membrane	91.25	87.42
HORVU5Hr1G041880.1	Barley	nucleus	70.02	69.45
HORVU2Hr1G081330.1	Barley	cytosol, nucleus	38.09	68.92
TraesCS5D01G192100.1	Wheat	nucleus	70.99	68.65
Os09t0346400-01	Rice	golgi, plasma membrane	69.21	68.1
TraesCS5B01G185200.2	Wheat	nucleus	69.37	67.94
TraesCS5A01G186800.1	Wheat	nucleus	67.91	67.58
HORVU4Hr1G058930.1	Barley	nucleus	59.16	66.0
HORVU0Hr1G030120.1	Barley	nucleus, plastid	70.02	64.19
GSMUA_Achr6P21610_001	Banana	cytosol	31.93	46.14
KRH27251	Soybean	endoplasmic reticulum, nucleus	43.11	44.04
KRH22077	Soybean	endoplasmic reticulum	43.6	43.67
VIT_19s0014g02640.t01	Wine grape	extracellular, nucleus	39.87	43.46
Bra019045.1-P	Field mustard	nucleus	42.46	43.31
CDY29843	Canola	nucleus	41.98	43.17
AT4G27500.1	Thale cress	nucleus	42.79	43.14
CDY56314	Canola	nucleus	31.28	41.51
CDX97389	Canola	nucleus	40.84	40.91
CDX89242	Canola	cytoskeleton, cytosol, nucleus	28.2	40.56
Solyc12g013860.1.1	Tomato	unclear	21.23	39.46
PGSC0003DMT400032400	Potato	nucleus	39.87	39.11
KRH55252	Soybean	nucleus	41.82	38.8
CDY14276	Canola	nucleus	39.06	38.75
Solyc07g063100.2.1	Tomato	nucleus	39.38	38.69
Bra026343.1-P	Field mustard	nucleus	39.06	38.01
CDY19058	Canola	endoplasmic reticulum, nucleus, plastid	35.49	35.96
CDY56315	Canola	nucleus	5.67	33.02
Bra010401.1-P	Field mustard	nucleus	39.87	32.93
CDY24116	Canola	nucleus	20.1	31.16
CDY26009	Canola	nucleus	20.1	31.0
Bra019016.1-P	Field mustard	nucleus	19.61	30.48
AT1G53110.1	Thale cress	nucleus	21.23	29.84
Bra001590.1-P	Field mustard	nucleus	28.2	29.39
AT3G15340.3	Thale cress	nucleus	27.55	28.86
AT5G36780.1	Thale cress	nucleus	26.58	28.47
AT5G36690.1	Thale cress	nucleus	26.58	28.47
CDX98546	Canola	nucleus	25.45	27.79
CDX97649	Canola	nucleus	24.8	27.67
CDX75821	Canola	nucleus	26.74	27.05
Bra027261.1-P	Field mustard	nucleus	24.8	27.03
CDX82440	Canola	nucleus	26.58	26.58
Zm00001d027914_P001	Maize	nucleus	6.81	17.07
Zm00001d015046_P002	Maize	cytosol, extracellular, mitochondrion, nucleus	5.83	16.0
Zm00001d021166_P001	Maize	cytosol	8.1	14.66
Zm00001d020965_P005	Maize	nucleus	21.23	9.75
Zm00001d006041_P002	Maize	nucleus	21.72	8.49

Protein Annotations

EntrezGene:103647378	MapMan:35.1	UniProt:A0A096RIV3	ncoils:Coil	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0010155	GO:GO:0016020	GO:GO:0016021	ProteinID:ONM21576.1	ProteinID:ONM21582.1	InterPro:PPI
PANTHER:PTHR32219	PANTHER:PTHR32219:SF2	TMHMM:TMhelix	UniParc:UPI0002219A56	EnsemblPlantsGene:Zm00001d005636	EnsemblPlants:Zm00001d005636_P001
EnsemblPlants:Zm00001d005636_T001	SEG:seg	:	:	:	:

Description

Proton pump-interactor 1

Coordinates

chr2:+:181459859..181465569

Molecular Weight (calculated)

69287.6 Da

IEP (calculated)

9.470

GRAVY (calculated)

-0.807

Length

617 amino acids

Sequence
(BLAST)

001: MGMEVVGAEA APAEIKVSDD VNLFQEKESK ATAKEREEAA VFGSETTTNV TDLAPPTDVK DEWPEPKQTY AFYFIKVRSF EDPKLRAKLE QADKEFQKKI
101: QARSKLIEAV RAKKAERSSI IAELKPLSAE NKQYNGVVNE KIKEMEPLRN SLGKFREENN AMRAQSAGLC SSIEDLDLTI KMLNDRIVHE SIPLSEEKRL
201: VKEIKDLEKT RSKVISNAAN RAKLQGTVVE KEAIQDQVKI IGEGIDEIKK ERQAVRSKIK VLEDELKLVD AEIASLQEDL DAATARKDKA YELLQELRAG
301: RDAKNAPFMQ NRTVLAKARD YSLRNMLSEL QELHKAEVDK FMSQWCESKA FREDYEKRIL TSLNSRQLTR DGRMRNPDEK PIFIESQAPA PEPEPFPVKL
401: PAKQVKEVPA PQADNASKIE APSKGPVQLH KAKAALDADD DYEAEPPKEK AKPTGADVAK LKEMKRQEEI EKNKLALERK KRQAEKQAAK AVARAQKEAE
501: KKLKKEEKKA KKKSGAADTD EPSESDAKSD EAMEAPAEQE VAPASTTVKK EQKESARYRN VVSRSKAPLP KAILKRKKAQ SYWSWAGPAA MVAAVLVALL
601: AVLGYYQYYY LPANTSN

Best Arabidopsis Sequence Match ( AT4G27500.1 )
(BLAST)

001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL

Arabidopsis Description

PPI1Proton pump-interactor 1 [Source:UniProtKB/Swiss-Prot;Acc:O23144]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.