Factsheet for Bra026343.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024452.1-P
Bra038835.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27500.1	Bra024452.1-P	AT2G18960.1	12182706
AT4G27500.1	Bra038835.1-P	AT2G18960.1	12182706
AT4G27500.1	Bra024452.1-P	AT2G18960.1	16279950
AT4G27500.1	Bra038835.1-P	AT2G18960.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89242	Canola	cytoskeleton, cytosol, nucleus	60.09	88.81
Bra019045.1-P	Field mustard	nucleus	67.19	70.41
AT4G27500.1	Thale cress	nucleus	67.67	70.1
Bra010401.1-P	Field mustard	nucleus	66.88	56.76
KRH22077	Soybean	endoplasmic reticulum	47.79	49.19
KRH27251	Soybean	endoplasmic reticulum, nucleus	45.9	48.18
VIT_19s0014g02640.t01	Wine grape	extracellular, nucleus	41.17	46.11
Solyc07g063100.2.1	Tomato	nucleus	44.95	45.38
PGSC0003DMT400032400	Potato	nucleus	44.64	44.99
Solyc12g013860.1.1	Tomato	unclear	23.19	44.28
GSMUA_Achr6P21610_001	Banana	cytosol	29.5	43.79
KRH55252	Soybean	nucleus	44.48	42.41
HORVU2Hr1G081330.1	Barley	cytosol, nucleus	21.77	40.47
Zm00001d005636_P001	Maize	nucleus	38.01	39.06
EER96610	Sorghum	nucleus	37.85	38.9
HORVU5Hr1G041880.1	Barley	nucleus	38.01	38.75
EER96609	Sorghum	cytosol	19.4	38.56
TraesCS5A01G186800.1	Wheat	nucleus	37.54	38.39
HORVU4Hr1G058930.1	Barley	nucleus	33.12	37.97
TraesCS5B01G185200.2	Wheat	nucleus	37.7	37.94
TraesCS5D01G192100.1	Wheat	nucleus	37.85	37.62
Os08t0390000-02	Rice	nucleus	36.59	37.36
Os09t0346400-01	Rice	golgi, plasma membrane	36.91	37.32
Zm00001d020175_P002	Maize	golgi, plasma membrane	37.54	36.96
HORVU0Hr1G030120.1	Barley	nucleus, plastid	38.01	35.81
Bra001590.1-P	Field mustard	nucleus	31.23	33.45
Bra027261.1-P	Field mustard	nucleus	29.5	33.04
Bra019016.1-P	Field mustard	nucleus	20.66	33.0
Bra025862.1-P	Field mustard	nucleus	21.45	9.7

Protein Annotations

EnsemblPlants:Bra026343.1	EnsemblPlants:Bra026343.1-P	EnsemblPlantsGene:Bra026343	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0010155
GO:GO:0016020	GO:GO:0016021	InterPro:PPI	ncoils:Coil	PANTHER:PTHR32219	PANTHER:PTHR32219:SF2
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545906	UniProt:M4EC34	MapMan:35.1	:

Description

AT4G27500 (E=2e-197) PPI1 | PPI1 (PROTON PUMP INTERACTOR 1); protein binding

Coordinates

chrA01:+:9919799..9922037

Molecular Weight (calculated)

71718.8 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.843

Length

634 amino acids

Sequence
(BLAST)

001: MGVEVLHFGG FEVVPAPFEV TNGKMDQGKG DKVSIKFGSL GEPPKKAEEK NNNNKNNVLI SDVPKDAAEE WPAAKQIHSF YFVKHRHFDD PKIKAKLDLA
101: EKELEKFNKA RAAVFDQLKA KRAERSELFD LLDPLKTERQ GFNAKFEEKR KEMEPLQQAL GKLRGNDGGT GRGPAICSSE EELNNMIYSY QYRIQHESIP
201: LTEEKQLLKE IRLLEGTRDK VIANEAMRAK IKESMGQKDD IQGQVKLMGA GLDGVKKERQ AISARINQLS EKVKATKDEI QVLENELKTV SEKRDNVYSN
301: IREIRKQSDE TNSGFYQGRN VLSKARDLAA QKNIDELEAL ANAEVEKFVS LWCSKKNFRE DYEKRILASL DARQLSRDGR MRNPEEKALV TPEAPPVAKV
401: PKAKVKQQPE EEPVSAPESD AAHVAQKTEK AKNALKVKNA VVVDDEDELY GLGKPQKEEE KKIDEATMRE MRKQEEIAKA KLAMERKKKQ AEKAAAKAAK
501: RAQMEADKRE KKAITVLSLC VLSFHSNSSP SLCVLQEREK KAKKNFDAEA VSEEVPEVSD AEKEEIEAQG EEKPQKEKAL EKPIRNRIRS RGGPETLPRA
601: ILKRKKKSTN YWLWAAPTAL VVPMLLVLGY YYAL

Best Arabidopsis Sequence Match ( AT4G27500.1 )
(BLAST)

001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL

Arabidopsis Description

PPI1Proton pump-interactor 1 [Source:UniProtKB/Swiss-Prot;Acc:O23144]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.