Factsheet for Bra001590.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82440	Canola	nucleus	90.03	86.39
CDX75821	Canola	nucleus	85.98	83.44
AT3G15340.3	Thale cress	nucleus	68.92	69.27
Bra027261.1-P	Field mustard	nucleus	59.97	62.72
AT5G36690.1	Thale cress	nucleus	54.22	55.73
AT5G36780.1	Thale cress	nucleus	54.22	55.73
Bra019016.1-P	Field mustard	nucleus	30.57	45.59
Bra019045.1-P	Field mustard	nucleus	34.29	33.55
KRH22077	Soybean	endoplasmic reticulum	34.29	32.95
KRH27251	Soybean	endoplasmic reticulum, nucleus	33.61	32.95
VIT_19s0014g02640.t01	Wine grape	extracellular, nucleus	31.25	32.69
Solyc07g063100.2.1	Tomato	nucleus	33.95	32.01
PGSC0003DMT400032400	Potato	nucleus	33.28	31.32
Bra026343.1-P	Field mustard	nucleus	33.45	31.23
GSMUA_Achr6P21610_001	Banana	cytosol	21.11	29.27
EER96610	Sorghum	nucleus	30.24	29.01
KRH55252	Soybean	nucleus	31.93	28.42
HORVU4Hr1G058930.1	Barley	nucleus	26.52	28.39
TraesCS5A01G186800.1	Wheat	nucleus	29.73	28.39
Zm00001d005636_P001	Maize	nucleus	29.39	28.2
HORVU5Hr1G041880.1	Barley	nucleus	29.05	27.65
TraesCS5B01G185200.2	Wheat	nucleus	29.39	27.62
TraesCS5D01G192100.1	Wheat	nucleus	29.56	27.43
Zm00001d020175_P002	Maize	golgi, plasma membrane	29.56	27.17
Os08t0390000-02	Rice	nucleus	28.21	26.89
Os09t0346400-01	Rice	golgi, plasma membrane	28.38	26.79
HORVU2Hr1G081330.1	Barley	cytosol, nucleus	15.37	26.69
EER96609	Sorghum	cytosol	14.02	26.02
Bra010401.1-P	Field mustard	nucleus	32.6	25.84
HORVU0Hr1G030120.1	Barley	nucleus, plastid	29.05	25.56
Solyc12g013860.1.1	Tomato	unclear	13.18	23.49
Bra025862.1-P	Field mustard	nucleus	19.59	8.27

Protein Annotations

EnsemblPlants:Bra001590.1	EnsemblPlants:Bra001590.1-P	EnsemblPlantsGene:Bra001590	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0010155
GO:GO:0016020	GO:GO:0016021	InterPro:PPI	ncoils:Coil	PANTHER:PTHR32219	PANTHER:PTHR32219:SF2
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540A3C	UniProt:M4CBL0	MapMan:35.1	:

Description

AT3G15340 (E=1e-174) PPI2 | PPI2 (proton pump interactor 2); protein binding

Coordinates

chrA03:-:17233846..17236114

Molecular Weight (calculated)

67585.1 Da

IEP (calculated)

6.336

GRAVY (calculated)

-0.714

Length

592 amino acids

Sequence
(BLAST)

001: MGAQIVLCDG FEVVSPPEMS DLILFGSDQS SGSNCGESTV TTEEDGTVFS GDSSPGGAAE DEWPEAKPFS FYFVKRPAYD DPEIKAKINE ADSQIYHCNK
101: LRIDISNAQK SERAEISSLY AQMESLGPKS EGYKMVFDEK KNEFDTLHEA LRTQRCSSSS QLSFSKEELN HLIYIAHYVI EHGNIGLEEE HWVLKETEKP
201: SEIVLSEDSL GEKEASIQRL KLMAVEMNEV KKELEAITWN INCLSDKLRQ IQNKIMMLDV EMAHILELRD RSYERIKMLR IQRDKGNAAC FQSLAVMRKA
301: KELAASGNVR DLEVLSSSEV DRFMTSWNND KAYRDDYVKR ISPSLYERQL SLDGRIRDQE GEAQVVQEKQ ALLKNGEEGM VVMHKRNREE SSSNSSQDEN
401: VVTAKQKKEV KKKVIDFNRS SDEESVVIDL EFPVYENPKK EVEEVDEETL KERKREEQIE KARLAMERKK KLQEKAAAKA ALRAQKEAEK KLKANYIIIE
501: CEKKAKKKAA ANSSEVDQSQ EVTNELEKVK TSAVHRSLFR KQKSFRYKHR GRGTEALPKA ILNRRRAHQY WVWGVSSAAL ALALSLGVLF LR

Best Arabidopsis Sequence Match ( AT3G15340.3 )
(BLAST)

001: MGAQIILSEG FEVVPPPEMN DLVLFGSNQS VSSCDVSTVT TEDGTVFSGD SSPGGATEED FPEEKPFSFY FVKQPAYDDP EIKAKIDEAG HEINRYNKDR
101: IVVSNAQESE KAEILSLFGQ MKSLVSKSEG YRVVIEEKKM EFDALHESLR NLRCSTSDQL CFSKEELDHL IYIAHYQIEH GSIGFEEEDW VLKETEKADG
201: IVLSEDSLAE KEASINRVKS MAVELNEVKK ELDAITWKIN HLSDKVGKSQ NNLRVLDVKK AHILEERDRS YERIKMLRIQ RDKGKAAFYQ SLPVMRKARE
301: LAASGNVRDL EVFASSEADR FMTQWNDDKA FRDDYVKRIS PSLCERQLNQ DGRIKDPEVQ VVWEKKVPVK GGEKVHETNR EDSSSNSSQY GSVITDKRKK
401: ETRKKAMDFN RSSAEESDVT DLEFSVYEKP KKEEEEVDEE TLKEREREEQ LEKARLAMER KRKLQEKAAA KAAIRAQKEA EKKLKECEKK AKKKAAANSS
501: SPSESDHSQE VTKDLEKVRT LAVSGKEKHQ KERSLFPKQR SFRYKHRGRG TEALPKAILN RRKAHKYWVW GLSSAALAVA LFLVVLLLR

Arabidopsis Description

PPI2PPI2 [Source:UniProtKB/TrEMBL;Acc:A0A178VC28]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.