Factsheet for HORVU0Hr1G030120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G111640.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27500.1	HORVU2Hr1G111640.2	AT2G18960.1	12182706
AT4G27500.1	HORVU2Hr1G111640.2	AT2G18960.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G041880.1	Barley	nucleus	92.42	100.0
HORVU4Hr1G058930.1	Barley	nucleus	75.04	91.32
HORVU2Hr1G081330.1	Barley	cytosol, nucleus	46.06	90.91
TraesCS5A01G186800.1	Wheat	nucleus	83.66	90.81
TraesCS5D01G192100.1	Wheat	nucleus	86.03	90.75
TraesCS5B01G185200.2	Wheat	nucleus	84.25	90.0
EER96610	Sorghum	nucleus	65.82	71.8
Zm00001d005636_P001	Maize	nucleus	64.19	70.02
Zm00001d020175_P002	Maize	golgi, plasma membrane	66.27	69.25
Os09t0346400-01	Rice	golgi, plasma membrane	63.45	68.1
EER96609	Sorghum	cytosol	28.08	59.25
GSMUA_Achr6P21610_001	Banana	cytosol	28.97	45.67
Bra019045.1-P	Field mustard	nucleus	39.38	43.8
CDY29843	Canola	nucleus	38.93	43.67
VIT_19s0014g02640.t01	Wine grape	extracellular, nucleus	36.26	43.11
KRH27251	Soybean	endoplasmic reticulum, nucleus	38.48	42.88
KRH22077	Soybean	endoplasmic reticulum	39.08	42.69
CDY56314	Canola	nucleus	29.42	42.58
AT4G27500.1	Thale cress	nucleus	37.89	41.67
CDX97389	Canola	nucleus	37.59	41.07
CDX89242	Canola	cytoskeleton, cytosol, nucleus	26.15	41.03
PGSC0003DMT400032400	Potato	nucleus	37.3	39.9
CDY14276	Canola	nucleus	36.4	39.39
Solyc07g063100.2.1	Tomato	nucleus	36.7	39.33
KRH55252	Soybean	nucleus	38.48	38.95
Bra026343.1-P	Field mustard	nucleus	35.81	38.01
Solyc12g013860.1.1	Tomato	unclear	18.28	37.05
CDY19058	Canola	endoplasmic reticulum, nucleus, plastid	32.54	35.96
CDY56315	Canola	nucleus	5.65	35.85
Bra010401.1-P	Field mustard	nucleus	36.26	32.66
CDY24116	Canola	nucleus	19.17	32.41
CDY26009	Canola	nucleus	19.17	32.25
Bra019016.1-P	Field mustard	nucleus	18.87	31.99
Bra001590.1-P	Field mustard	nucleus	25.56	29.05
AT1G53110.1	Thale cress	nucleus	18.87	28.93
AT3G15340.3	Thale cress	nucleus	24.67	28.18
AT5G36780.1	Thale cress	nucleus	23.33	27.26
AT5G36690.1	Thale cress	nucleus	23.33	27.26
Bra027261.1-P	Field mustard	nucleus	22.44	26.68
CDX98546	Canola	nucleus	22.29	26.55
CDX97649	Canola	nucleus	21.69	26.4
CDX75821	Canola	nucleus	23.77	26.23
CDX82440	Canola	nucleus	23.77	25.93
HORVU5Hr1G073990.1	Barley	mitochondrion	20.95	13.31

Protein Annotations

EnsemblPlants:HORVU0Hr1G030120.1	EnsemblPlantsGene:HORVU0Hr1G030120	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0010155	GO:GO:0016020
GO:GO:0016021	InterPro:PPI	ncoils:Coil	PANTHER:PTHR32219	PANTHER:PTHR32219:SF2	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B46A8C6	UniProt:A0A287EA47	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchrUn:+:168610983..168617076

Molecular Weight (calculated)

75380.2 Da

IEP (calculated)

9.687

GRAVY (calculated)

-0.921

Length

673 amino acids

Sequence
(BLAST)

001: PASSSGHAAQ TPHTPPPPHP LPNPIQPDLA AAPPPDRSAA PVRSRSSLHR DMGMEVVGAE AAPAQVKVAD EEVALFQDKE SQATAREREE AAVFGSDNGK
101: AAANAPNGSD MAPPKDAADE WPEPKQTYTF YFVKVRSFED PKLRAKLEQA EKDFQNKIQA RSKIIEAIKA KKTERAAVLA ELRPLSAENR QYNEAFNEKL
201: EEMKPFRNRL GKFRDENNAM RAESAGLCSS LEELEHEIKR LNHRISHESI SLDEEKRLIK EIKTLEKTRP KVSSNAAKRA KMQDTVVERD AIQDQVKIIG
301: DGIDGVKKER QAVRSKIKVL DDEMKVVDGE IALLQEDLNA ATARKDKAYE SLTELRKLRD LANASFHQNR IVLNKARDYS SRNEVEELQE LHKTEVEKFM
401: TQWCSSKTFR EDYEKRILTS LNGRQLTRDG RMRNPDEKPI FIETQQPVAQ EPVPLKAPLK QAKEAAAPQV VAPKEEPLAK ASAKSAKVKA SVDADDDAYE
501: AEPPKEKPKP KEVDVAKLKE IKRQEEIEKN KLALERKKKQ AEKQAAKAAA RAQKEAEKKL KKEEKKTKKK TEPADTDEPT DSDTKSDEAA EAQAEDEFTP
601: TTLNKEQKQN VRPRNVVTKT KAPLPKAILK RKKAQSYRSW ATPAVVISAV AVLVALLAAL GYYQYYRPAS TSN

Best Arabidopsis Sequence Match ( AT4G27500.1 )
(BLAST)

001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL

Arabidopsis Description

PPI1Proton pump-interactor 1 [Source:UniProtKB/Swiss-Prot;Acc:O23144]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.