Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89242 | Canola | cytoskeleton, cytosol, nucleus | 51.96 | 74.13 |
| CDX97389 | Canola | nucleus | 71.9 | 71.43 |
| CDY56314 | Canola | nucleus | 53.27 | 70.11 |
| Bra019045.1-P | Field mustard | nucleus | 69.12 | 69.92 |
| CDY29843 | Canola | nucleus | 67.81 | 69.17 |
| CDY14276 | Canola | nucleus | 69.77 | 68.65 |
| Bra026343.1-P | Field mustard | nucleus | 70.1 | 67.67 |
| CDY19058 | Canola | endoplasmic reticulum, nucleus, plastid | 64.05 | 64.37 |
| Bra010401.1-P | Field mustard | nucleus | 70.42 | 57.7 |
| KRH22077 | Soybean | endoplasmic reticulum | 52.45 | 52.11 |
| KRH27251 | Soybean | endoplasmic reticulum, nucleus | 51.31 | 51.99 |
| VIT_19s0014g02640.t01 | Wine grape | extracellular, nucleus | 46.73 | 50.53 |
| CDY56315 | Canola | nucleus | 8.17 | 47.17 |
| GSMUA_Achr6P21610_001 | Banana | cytosol | 32.84 | 47.07 |
| PGSC0003DMT400032400 | Potato | nucleus | 48.04 | 46.74 |
| Solyc07g063100.2.1 | Tomato | nucleus | 47.22 | 46.02 |
| Solyc12g013860.1.1 | Tomato | unclear | 24.84 | 45.78 |
| KRH55252 | Soybean | nucleus | 49.02 | 45.11 |
| Zm00001d005636_P001 | Maize | nucleus | 43.14 | 42.79 |
| EER96610 | Sorghum | nucleus | 42.81 | 42.46 |
| HORVU5Hr1G041880.1 | Barley | nucleus | 41.67 | 41.0 |
| TraesCS5A01G186800.1 | Wheat | nucleus | 41.34 | 40.81 |
| HORVU2Hr1G081330.1 | Barley | cytosol, nucleus | 22.55 | 40.47 |
| TraesCS5B01G185200.2 | Wheat | nucleus | 41.5 | 40.32 |
| Zm00001d020175_P002 | Maize | golgi, plasma membrane | 42.32 | 40.22 |
| EER96609 | Sorghum | cytosol | 20.91 | 40.13 |
| TraesCS5D01G192100.1 | Wheat | nucleus | 41.83 | 40.13 |
| Os08t0390000-02 | Rice | nucleus | 40.52 | 39.94 |
| Os09t0346400-01 | Rice | golgi, plasma membrane | 40.36 | 39.39 |
| HORVU4Hr1G058930.1 | Barley | nucleus | 35.46 | 39.24 |
| HORVU0Hr1G030120.1 | Barley | nucleus, plastid | 41.67 | 37.89 |
| AT1G53110.1 | Thale cress | nucleus | 25.0 | 34.85 |
| AT3G15340.3 | Thale cress | nucleus | 33.17 | 34.47 |
| AT5G36780.1 | Thale cress | nucleus | 31.86 | 33.85 |
| AT5G36690.1 | Thale cress | nucleus | 31.86 | 33.85 |
| AT1G20970.1 | Thale cress | nucleus | 22.39 | 10.04 |
Protein Annotations
| MapMan:35.1 | EntrezGene:828859 | ProteinID:AEE85350.1 | EMBL:AJ002020 | EMBL:AK316706 | ArrayExpress:AT4G27500 |
| EnsemblPlantsGene:AT4G27500 | RefSeq:AT4G27500 | TAIR:AT4G27500 | RefSeq:AT4G27500-TAIR-G | EnsemblPlants:AT4G27500.1 | TAIR:AT4G27500.1 |
| EMBL:AY050365 | EMBL:AY143914 | Unigene:At.3381 | ProteinID:CAB43882.1 | ProteinID:CAB81400.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0010155 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_194480.2 | UniProt:O23144 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | InterPro:PPI | Symbol:PPI1 | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF2 | TMHMM:TMhelix |
| UniParc:UPI00000AC6D4 | SEG:seg | : | : | : | : |
Description
PPI1Proton pump-interactor 1 [Source:UniProtKB/Swiss-Prot;Acc:O23144]
Coordinates
chr4:+:13743011..13746211
Molecular Weight (calculated)
68883.0 Da
IEP (calculated)
9.620
GRAVY (calculated)
-0.952
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.