Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G111640.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G27500.1 | HORVU2Hr1G111640.2 | AT2G18960.1 | 12182706 |
| AT4G27500.1 | HORVU2Hr1G111640.2 | AT2G18960.1 | 16279950 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G058930.1 | Barley | nucleus | 88.27 | 54.43 |
| EER96609 | Sorghum | cytosol | 49.56 | 52.98 |
| HORVU5Hr1G041880.1 | Barley | nucleus | 90.91 | 49.84 |
| TraesCS5A01G186800.1 | Wheat | nucleus | 84.75 | 46.61 |
| HORVU0Hr1G030120.1 | Barley | nucleus, plastid | 90.91 | 46.06 |
| TraesCS5B01G185200.2 | Wheat | nucleus | 85.04 | 46.03 |
| TraesCS5D01G192100.1 | Wheat | nucleus | 85.34 | 45.61 |
| EER96610 | Sorghum | nucleus | 69.79 | 38.57 |
| Zm00001d005636_P001 | Maize | nucleus | 68.92 | 38.09 |
| GSMUA_Achr6P21610_001 | Banana | cytosol | 47.51 | 37.94 |
| Zm00001d020175_P002 | Maize | golgi, plasma membrane | 69.5 | 36.8 |
| Os09t0346400-01 | Rice | golgi, plasma membrane | 64.52 | 35.09 |
| Solyc12g013860.1.1 | Tomato | unclear | 33.43 | 34.34 |
| CDX89242 | Canola | cytoskeleton, cytosol, nucleus | 41.06 | 32.63 |
| CDY56314 | Canola | nucleus | 41.64 | 30.54 |
| VIT_19s0014g02640.t01 | Wine grape | extracellular, nucleus | 45.45 | 27.39 |
| KRH27251 | Soybean | endoplasmic reticulum, nucleus | 43.99 | 24.83 |
| KRH22077 | Soybean | endoplasmic reticulum | 43.4 | 24.03 |
| CDY29843 | Canola | nucleus | 42.23 | 24.0 |
| Bra019045.1-P | Field mustard | nucleus | 42.23 | 23.8 |
| CDY14276 | Canola | nucleus | 41.64 | 22.83 |
| PGSC0003DMT400032400 | Potato | nucleus | 41.94 | 22.73 |
| KRH55252 | Soybean | nucleus | 44.28 | 22.71 |
| Solyc07g063100.2.1 | Tomato | nucleus | 41.64 | 22.61 |
| AT4G27500.1 | Thale cress | nucleus | 40.47 | 22.55 |
| CDX97389 | Canola | nucleus | 40.47 | 22.4 |
| CDY19058 | Canola | endoplasmic reticulum, nucleus, plastid | 39.0 | 21.84 |
| Bra026343.1-P | Field mustard | nucleus | 40.47 | 21.77 |
| Bra010401.1-P | Field mustard | nucleus | 41.64 | 19.01 |
| Bra001590.1-P | Field mustard | nucleus | 26.69 | 15.37 |
| AT3G15340.3 | Thale cress | nucleus | 25.81 | 14.94 |
| CDX75821 | Canola | nucleus | 26.39 | 14.75 |
| CDX82440 | Canola | nucleus | 26.69 | 14.75 |
| AT1G53110.1 | Thale cress | nucleus | 18.48 | 14.35 |
| CDY56315 | Canola | nucleus | 4.4 | 14.15 |
| CDY26009 | Canola | nucleus | 16.42 | 14.0 |
| Bra019016.1-P | Field mustard | nucleus | 16.13 | 13.85 |
| CDY24116 | Canola | nucleus | 16.13 | 13.82 |
| AT5G36780.1 | Thale cress | nucleus | 23.17 | 13.72 |
| AT5G36690.1 | Thale cress | nucleus | 23.17 | 13.72 |
| CDX97649 | Canola | nucleus | 21.41 | 13.2 |
| CDX98546 | Canola | nucleus | 21.11 | 12.74 |
| Bra027261.1-P | Field mustard | nucleus | 20.53 | 12.37 |
| HORVU5Hr1G073990.1 | Barley | mitochondrion | 20.23 | 6.52 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G081330.1 | EnsemblPlantsGene:HORVU2Hr1G081330 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010155 | GO:GO:0016020 |
| InterPro:PPI | ncoils:Coil | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF2 | SEG:seg | UniParc:UPI000B46B586 |
| UniProt:A0A287IM96 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:589776912..589780320
Molecular Weight (calculated)
39039.3 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.842
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: TRSTCYGIIP TEAAVFGSEN GKAAANAPNG SDMAPPKDVP DEWPESKQTY TFYFVKVRSF EDPKLRAKLE QAEKDFQNKI QARSKIIEAI KSKKTEHAVV
101: FAELRPLSAE NKQYSEALNE KLEEMKPLRN RLGKFRDENN AMQAESAGLC SSLEELEHEI KRLNHRISHE SIYLDEKKRL TKETKTLEKT RPKVSSNAAK
201: RAKMQDTVVE RDAIQDQVKI IGDGIDGVKK ERQAVRSKIK VLDNEMKVVD GEIALLQEDL NAATARKNKA YESLTELRKL CDLANASFHQ NRIVLNKARD
301: YSSRNAVEEL QELHKTEVEK FMTQWCSSKT FREDYEKRIL T
101: FAELRPLSAE NKQYSEALNE KLEEMKPLRN RLGKFRDENN AMQAESAGLC SSLEELEHEI KRLNHRISHE SIYLDEKKRL TKETKTLEKT RPKVSSNAAK
201: RAKMQDTVVE RDAIQDQVKI IGDGIDGVKK ERQAVRSKIK VLDNEMKVVD GEIALLQEDL NAATARKNKA YESLTELRKL CDLANASFHQ NRIVLNKARD
301: YSSRNAVEEL QELHKTEVEK FMTQWCSSKT FREDYEKRIL T
001: MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL
101: KELEKLNKAR TGVLDKLRAK RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE ELNSMIYSYQ YRIQHESIPL
201: TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI
301: HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP
401: SETEVVPKAK AKPQPKEEPV SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI AKAKQAMERK KKLAEKAAAK
501: AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV
601: LLLLVLGYYY VL
Arabidopsis Description
PPI1Proton pump-interactor 1 [Source:UniProtKB/Swiss-Prot;Acc:O23144]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.