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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G36780.1 Thale cress nucleus 100.0 100.0
AT3G15340.3 Thale cress nucleus 61.28 59.93
Bra001590.1-P Field mustard nucleus 55.73 54.22
CDX98546 Canola nucleus 51.04 52.04
CDX75821 Canola nucleus 53.12 50.16
CDX82440 Canola nucleus 53.47 49.92
CDX97649 Canola nucleus 47.4 49.37
Bra027261.1-P Field mustard nucleus 48.09 48.94
AT1G53110.1 Thale cress nucleus 31.08 40.77
KRH22077 Soybean endoplasmic reticulum 34.2 31.98
AT4G27500.1 Thale cress nucleus 33.85 31.86
KRH27251 Soybean endoplasmic reticulum, nucleus 32.81 31.29
Solyc07g063100.2.1 Tomato nucleus 32.47 29.78
VIT_19s0014g02640.t01 Wine grape extracellular, nucleus 28.3 28.8
PGSC0003DMT400032400 Potato nucleus 31.42 28.78
KRH55252 Soybean nucleus 31.42 27.22
EER96610 Sorghum nucleus 28.65 26.74
Zm00001d005636_P001 Maize nucleus 28.47 26.58
TraesCS5A01G186800.1 Wheat nucleus 27.26 25.32
HORVU5Hr1G041880.1 Barley nucleus 27.26 25.24
Zm00001d020175_P002 Maize golgi, plasma membrane 28.12 25.16
Os08t0390000-02 Rice nucleus 26.91 24.96
TraesCS5B01G185200.2 Wheat nucleus 27.26 24.92
GSMUA_Achr6P21610_001 Banana cytosol 18.4 24.82
HORVU4Hr1G058930.1 Barley nucleus 23.78 24.77
Solyc12g013860.1.1 Tomato unclear 14.24 24.7
TraesCS5D01G192100.1 Wheat nucleus 27.26 24.61
Os09t0346400-01 Rice golgi, plasma membrane 26.74 24.56
EER96609 Sorghum cytosol 13.19 23.82
HORVU0Hr1G030120.1 Barley nucleus, plastid 27.26 23.33
HORVU2Hr1G081330.1 Barley cytosol, nucleus 13.72 23.17
AT1G20970.1 Thale cress nucleus 18.92 7.99
Protein Annotations
MapMan:35.1EntrezGene:833634EntrezGene:833645ProteinID:AED94098.1ProteinID:AED94111.1ArrayExpress:AT5G36690
EnsemblPlantsGene:AT5G36690RefSeq:AT5G36690TAIR:AT5G36690RefSeq:AT5G36690-TAIR-GEnsemblPlants:AT5G36690.1TAIR:AT5G36690.1
Unigene:At.55163ProteinID:BAA97551.1ProteinID:BAA98056.1ncoils:CoilGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0010155GO:GO:0016020GO:GO:0016021RefSeq:NP_198484.2RefSeq:NP_568541.1
UniProt:P0DKC0UniProt:P0DKC1InterPro:PPIPANTHER:PTHR32219PANTHER:PTHR32219:SF2TMHMM:TMhelix
UniParc:UPI0000162744SEG:seg::::
Description
PPI3AProton pump-interactor 3B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC0]
Coordinates
chr5:-:14415185..14417288
Molecular Weight (calculated)
66455.1 Da
IEP (calculated)
6.266
GRAVY (calculated)
-0.703
Length
576 amino acids
Sequence
(BLAST)
001: MDEQIIFCDG FEVVPSPEIN DLILYECDQS LTNSEVTTDE EEDTIFSGGD SSSGLAAEED SSGDKPLSFY IVKQPVYDNP EIKAKIDEAN QEIFRCNELR
101: INVLSAKKSE LAEVSSLYTQ MESLVPQSEG YRMVIEEKKK EFDTLLEALR NLRCTTSDQL CFTKEELDHL SYIAQYQIEY GSIGLEEEDW MLKETEKPDG
201: IILSEKEASI NRVKSMALEL NEVKNELDAI TWKINDLSDK LWKSQNNIRV LDLEKAHILE KRDRFYARIK MLRIQRDKGN AAFFQSLSVM CKAKELAASG
301: NVRELEVFAS SEVDRFMTLW NDDKAFREDY VRRISHSLCE RELNEDGRIK DADLQIFWEK KVPVKTIKRS EKVHKMNRED SSSNSSEDGN VITDKRKKET
401: KSDVIVYEKP KKKEEEIDEE ALKERKREEQ LEKARLVMER KRKLQEKAAA KAAIRAQKEA EKKLKAIILS CSHFFNECEK KAKKKAAANS TSPSESDQVI
501: NDEKVRTLAV SGKEKHQKER LLFPKQRSFR YKHRGSGTEA LPKAILNRRK ARRYWVWGLS SAALAVSLVL VVLLLR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.