Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT5G36780.1 | Thale cress | nucleus | 100.0 | 100.0 |
AT3G15340.3 | Thale cress | nucleus | 61.28 | 59.93 |
Bra001590.1-P | Field mustard | nucleus | 55.73 | 54.22 |
CDX98546 | Canola | nucleus | 51.04 | 52.04 |
CDX75821 | Canola | nucleus | 53.12 | 50.16 |
CDX82440 | Canola | nucleus | 53.47 | 49.92 |
CDX97649 | Canola | nucleus | 47.4 | 49.37 |
Bra027261.1-P | Field mustard | nucleus | 48.09 | 48.94 |
AT1G53110.1 | Thale cress | nucleus | 31.08 | 40.77 |
KRH22077 | Soybean | endoplasmic reticulum | 34.2 | 31.98 |
AT4G27500.1 | Thale cress | nucleus | 33.85 | 31.86 |
KRH27251 | Soybean | endoplasmic reticulum, nucleus | 32.81 | 31.29 |
Solyc07g063100.2.1 | Tomato | nucleus | 32.47 | 29.78 |
VIT_19s0014g02640.t01 | Wine grape | extracellular, nucleus | 28.3 | 28.8 |
PGSC0003DMT400032400 | Potato | nucleus | 31.42 | 28.78 |
KRH55252 | Soybean | nucleus | 31.42 | 27.22 |
EER96610 | Sorghum | nucleus | 28.65 | 26.74 |
Zm00001d005636_P001 | Maize | nucleus | 28.47 | 26.58 |
TraesCS5A01G186800.1 | Wheat | nucleus | 27.26 | 25.32 |
HORVU5Hr1G041880.1 | Barley | nucleus | 27.26 | 25.24 |
Zm00001d020175_P002 | Maize | golgi, plasma membrane | 28.12 | 25.16 |
Os08t0390000-02 | Rice | nucleus | 26.91 | 24.96 |
TraesCS5B01G185200.2 | Wheat | nucleus | 27.26 | 24.92 |
GSMUA_Achr6P21610_001 | Banana | cytosol | 18.4 | 24.82 |
HORVU4Hr1G058930.1 | Barley | nucleus | 23.78 | 24.77 |
Solyc12g013860.1.1 | Tomato | unclear | 14.24 | 24.7 |
TraesCS5D01G192100.1 | Wheat | nucleus | 27.26 | 24.61 |
Os09t0346400-01 | Rice | golgi, plasma membrane | 26.74 | 24.56 |
EER96609 | Sorghum | cytosol | 13.19 | 23.82 |
HORVU0Hr1G030120.1 | Barley | nucleus, plastid | 27.26 | 23.33 |
HORVU2Hr1G081330.1 | Barley | cytosol, nucleus | 13.72 | 23.17 |
AT1G20970.1 | Thale cress | nucleus | 18.92 | 7.99 |
Protein Annotations
MapMan:35.1 | EntrezGene:833634 | EntrezGene:833645 | ProteinID:AED94098.1 | ProteinID:AED94111.1 | ArrayExpress:AT5G36690 |
EnsemblPlantsGene:AT5G36690 | RefSeq:AT5G36690 | TAIR:AT5G36690 | RefSeq:AT5G36690-TAIR-G | EnsemblPlants:AT5G36690.1 | TAIR:AT5G36690.1 |
Unigene:At.55163 | ProteinID:BAA97551.1 | ProteinID:BAA98056.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0010155 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_198484.2 | RefSeq:NP_568541.1 |
UniProt:P0DKC0 | UniProt:P0DKC1 | InterPro:PPI | PANTHER:PTHR32219 | PANTHER:PTHR32219:SF2 | TMHMM:TMhelix |
UniParc:UPI0000162744 | SEG:seg | : | : | : | : |
Description
PPI3AProton pump-interactor 3B [Source:UniProtKB/Swiss-Prot;Acc:P0DKC0]
Coordinates
chr5:-:14415185..14417288
Molecular Weight (calculated)
66455.1 Da
IEP (calculated)
6.266
GRAVY (calculated)
-0.703
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEQIIFCDG FEVVPSPEIN DLILYECDQS LTNSEVTTDE EEDTIFSGGD SSSGLAAEED SSGDKPLSFY IVKQPVYDNP EIKAKIDEAN QEIFRCNELR
101: INVLSAKKSE LAEVSSLYTQ MESLVPQSEG YRMVIEEKKK EFDTLLEALR NLRCTTSDQL CFTKEELDHL SYIAQYQIEY GSIGLEEEDW MLKETEKPDG
201: IILSEKEASI NRVKSMALEL NEVKNELDAI TWKINDLSDK LWKSQNNIRV LDLEKAHILE KRDRFYARIK MLRIQRDKGN AAFFQSLSVM CKAKELAASG
301: NVRELEVFAS SEVDRFMTLW NDDKAFREDY VRRISHSLCE RELNEDGRIK DADLQIFWEK KVPVKTIKRS EKVHKMNRED SSSNSSEDGN VITDKRKKET
401: KSDVIVYEKP KKKEEEIDEE ALKERKREEQ LEKARLVMER KRKLQEKAAA KAAIRAQKEA EKKLKAIILS CSHFFNECEK KAKKKAAANS TSPSESDQVI
501: NDEKVRTLAV SGKEKHQKER LLFPKQRSFR YKHRGSGTEA LPKAILNRRK ARRYWVWGLS SAALAVSLVL VVLLLR
101: INVLSAKKSE LAEVSSLYTQ MESLVPQSEG YRMVIEEKKK EFDTLLEALR NLRCTTSDQL CFTKEELDHL SYIAQYQIEY GSIGLEEEDW MLKETEKPDG
201: IILSEKEASI NRVKSMALEL NEVKNELDAI TWKINDLSDK LWKSQNNIRV LDLEKAHILE KRDRFYARIK MLRIQRDKGN AAFFQSLSVM CKAKELAASG
301: NVRELEVFAS SEVDRFMTLW NDDKAFREDY VRRISHSLCE RELNEDGRIK DADLQIFWEK KVPVKTIKRS EKVHKMNRED SSSNSSEDGN VITDKRKKET
401: KSDVIVYEKP KKKEEEIDEE ALKERKREEQ LEKARLVMER KRKLQEKAAA KAAIRAQKEA EKKLKAIILS CSHFFNECEK KAKKKAAANS TSPSESDQVI
501: NDEKVRTLAV SGKEKHQKER LLFPKQRSFR YKHRGSGTEA LPKAILNRRK ARRYWVWGLS SAALAVSLVL VVLLLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.