Factsheet for Zm00001d013197_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005636_P001
Zm00001d013197_P002
Zm00001d020175_P002
Zm00001d027407_P003
Zm00001d027603_P001
Zm00001d033487_P001
Zm00001d045237_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	Zm00001d013197_P002	AT2G18960.1	12182706
AT2G18960.1	Zm00001d027407_P003	AT2G18960.1	12182706
AT2G18960.1	Zm00001d027603_P001	AT2G18960.1	12182706
AT2G18960.1	Zm00001d033487_P001	AT2G18960.1	12182706
AT2G18960.1	Zm00001d045237_P004	AT2G18960.1	12182706
AT2G18960.1	Zm00001d005636_P001	AT4G27500.1	12182706
AT2G18960.1	Zm00001d020175_P002	AT4G27500.1	12182706
AT2G18960.1	Zm00001d005636_P001	AT4G27500.1	16279950
AT2G18960.1	Zm00001d020175_P002	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033487_P001	Maize	plastid	96.1	94.76
Zm00001d027407_P003	Maize	cytosol	8.33	37.01
Zm00001d029535_P001	Maize	cytosol, plasma membrane, plastid	6.38	20.69
Zm00001d045122_P001	Maize	plasma membrane	24.11	18.23
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	30.32	17.96
AT2G18960.1	Thale cress	peroxisome	30.14	17.91
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.14	17.91
Zm00001d026490_P010	Maize	peroxisome	31.03	17.82
Zm00001d002006_P013	Maize	peroxisome	24.11	17.8
Bra020447.1-P	Field mustard	plasma membrane	21.63	17.76
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.96	17.75
Bra010299.1-P	Field mustard	plasma membrane	29.43	17.68
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.61	17.63
Bra011172.1-P	Field mustard	peroxisome	29.61	17.62
AT5G57350.1	Thale cress	peroxisome	29.61	17.6
Zm00001d041214_P003	Maize	plasma membrane	29.79	17.57
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.43	17.51
Zm00001d033552_P003	Maize	peroxisome	29.08	17.19
Bra024452.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.9	17.18
AT4G30190.2	Thale cress	peroxisome	29.79	17.13
Zm00001d027265_P007	Maize	plasma membrane	27.66	17.07
Zm00001d052022_P002	Maize	plasma membrane	28.19	17.04
Zm00001d019062_P005	Maize	plasma membrane	26.77	17.0
Bra024101.1-P	Field mustard	plasma membrane	27.13	16.91
Zm00001d050214_P001	Maize	plasma membrane	28.01	16.63
Zm00001d027490_P002	Maize	plasma membrane	27.3	16.08
AT4G11730.1	Thale cress	peroxisome	21.81	15.13
Zm00001d014347_P002	Maize	cytosol	5.14	14.72
Zm00001d036728_P001	Maize	cytosol	17.73	14.06
Zm00001d019796_P001	Maize	plasma membrane	2.66	12.82
Zm00001d019307_P001	Maize	cytosol	2.13	11.21
Zm00001d046560_P001	Maize	cytosol, peroxisome, plasma membrane	12.94	10.85
Zm00001d007775_P001	Maize	peroxisome	12.23	10.42
Zm00001d045237_P004	Maize	cytosol	2.3	9.63
Zm00001d021000_P008	Maize	cytosol, peroxisome, plasma membrane	7.98	9.62
Zm00001d027304_P026	Maize	plasma membrane	13.12	8.31
Zm00001d035826_P001	Maize	peroxisome, plasma membrane, plastid, vacuole	2.66	7.94
Zm00001d027603_P001	Maize	plasma membrane	3.37	5.23

Protein Annotations

EnsemblPlants:Zm00001d013197_P002	EnsemblPlants:Zm00001d013197_T002	EnsemblPlantsGene:Zm00001d013197	Gene3D:3.40.1110.10	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:IPR023299	InterPro:P-loop_NTPase	PANTHER:PTHR42861
PANTHER:PTHR42861:SF19	ProteinID:AQK62633.1	SEG:seg	SUPFAM:SSF52540	UniParc:UPI0008435789	UniProt:A0A1D6GGF5
MapMan:35.1	:	:	:	:	:

Description

ATPase 4 plasma membrane-type

Coordinates

chr5:+:6197605..6202721

Molecular Weight (calculated)

61093.3 Da

IEP (calculated)

9.769

GRAVY (calculated)

-0.307

Length

564 amino acids

Sequence
(BLAST)

001: MPHRTPATAS SLRMREPPAQ PAATPTHAAV PTPAAKPPPR PLHESRARIP PCDAATAHPP ATTSPITLAP LNLIEVSKAS KRKAAATAES GGKAVVEFLL
101: SSSATVAANK VANDIAALKL SGCTCTGVLT SHPFSHDIHG TSDAVRQYLW LFEQHNVMEI LIIAGSTCSS SQCQSARLYS ARSAVEHTTS GVQSFHSVGE
201: NIFDKIATRG ISIAMSHSQR FGFLGPNGLG KTTLINMREI LILWQELKQT QKPLKQNKRC KINRSNPIAE MKPPKIMRNQ SFDLCSPIAT SDGATPVASM
301: GARKDDHRHV LLLAVRTSRT ENQDTFDTAM DGMLADPKEA MTGIREIHFL PFNPIDNRTA LTYIDADGNY TVSARVLLNS KINRSNPIVE MKPPKIMRNQ
401: SFDLCSPIAT SDGATPVASM GARKDDHRHV LLLAVRTSRT ENQDTFDTAM DGMLADPKEA MTGIREIHFL PFNPIDNRTA LTYIDADGNY TVSARVLLNS
501: KINRSNPIAE MKPPKIMRNQ SFDLCSPIAT SDGATPVASM GARKDGQLGN LLKALKLLDT STKS

Best Arabidopsis Sequence Match ( AT5G57350.3 )
(BLAST)

001: MYPIQRRHYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS HKLSQQGAIT KRMTAIEEMA GMDVLCSDKT GTLTLNKLSV DKNLIEVYCK GVEKDEVLLF
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV

Arabidopsis Description

AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [mitochondrion,plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.