Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G113900.1 | Wheat | plasma membrane | 99.19 | 99.19 |
| TraesCS6A01G083200.1 | Wheat | peroxisome, plasma membrane, plastid, vacuole | 98.79 | 98.79 |
| Os02t0125300-01 | Rice | plasma membrane | 85.43 | 84.74 |
| EES04425 | Sorghum | plastid | 86.64 | 82.95 |
| Zm00001d053952_P001 | Maize | plasma membrane | 84.21 | 80.31 |
| HORVU6Hr1G014450.1 | Barley | nucleus | 98.79 | 77.96 |
| GSMUA_Achr7P07470_001 | Banana | plasma membrane | 73.68 | 75.52 |
| Bra024963.1-P | Field mustard | endoplasmic reticulum, golgi | 27.53 | 71.58 |
| CDY33515 | Canola | endoplasmic reticulum, golgi | 27.53 | 71.58 |
| CDY25984 | Canola | plasma membrane | 69.23 | 69.23 |
| AT5G47120.1 | Thale cress | plasma membrane | 68.83 | 68.83 |
| CDY43441 | Canola | plasma membrane | 68.42 | 68.42 |
| Bra017502.1-P | Field mustard | plasma membrane | 68.42 | 68.42 |
| Bra022106.1-P | Field mustard | plasma membrane | 68.02 | 68.02 |
| CDY28973 | Canola | plasma membrane | 67.61 | 67.61 |
| PGSC0003DMT400067509 | Potato | plasma membrane | 67.61 | 67.34 |
| CDY40569 | Canola | plasma membrane | 67.21 | 67.21 |
| Solyc08g077980.2.1 | Tomato | plasma membrane | 67.61 | 67.07 |
| VIT_00s1665g00010.t01 | Wine grape | golgi, plasma membrane, vacuole | 58.3 | 66.67 |
| KRH77301 | Soybean | plasma membrane | 64.37 | 65.16 |
| KRH57502 | Soybean | plasma membrane | 62.35 | 62.35 |
| Zm00001d015091_P003 | Maize | mitochondrion, nucleus, peroxisome, plasma membrane | 81.78 | 61.21 |
| KRH04210 | Soybean | plasma membrane | 57.49 | 57.72 |
| KRH28186 | Soybean | peroxisome | 63.97 | 57.66 |
| TraesCS1D01G018500.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 61.54 | 52.6 |
| AT4G17580.1 | Thale cress | plasma membrane | 49.8 | 49.8 |
| AT5G47130.2 | Thale cress | endoplasmic reticulum, extracellular, golgi | 45.34 | 49.56 |
| KRH24687 | Soybean | extracellular | 20.65 | 43.22 |
| Solyc01g090000.1.1 | Tomato | plasma membrane | 25.91 | 26.67 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G077000.1 | EnsemblPlantsGene:TraesCS6D01G077000 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF76 | PFAM:PF01027 |
| SEG:seg | TIGR:cd10430 | TMHMM:TMhelix | MapMan:27.2.6 | : | : |
Description
No Description!
Coordinates
chr6D:+:41520167..41528334
Molecular Weight (calculated)
27062.3 Da
IEP (calculated)
8.068
GRAVY (calculated)
0.539
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAFYSTSSA AASGWGYDSL KNFREISPAV QSHLKLVYLT LCFALASSAV GAYLHIALNI GGMLTMLACV GTIAWMFSVP VYEERKRFGL LMGAALLEGA
101: SVGPLIELAI DFDPSILVTG FVGTAIAFGC FSGAAIIAKR REYLYLGGLL SSGLSILLWL QFATSIFGHS SGSFMFEVYF GLLIFLGYMV YDTQEIIERA
201: HHGDMDYIKH ALTLFTDFVA VLVRVLIIML KNAGDKSEDK KKRKRRS
101: SVGPLIELAI DFDPSILVTG FVGTAIAFGC FSGAAIIAKR REYLYLGGLL SSGLSILLWL QFATSIFGHS SGSFMFEVYF GLLIFLGYMV YDTQEIIERA
201: HHGDMDYIKH ALTLFTDFVA VLVRVLIIML KNAGDKSEDK KKRKRRS
001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
Arabidopsis Description
BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.