Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G412500.1 | Wheat | golgi | 97.97 | 97.97 |
| HORVU3Hr1G092660.1 | Barley | plasma membrane | 98.11 | 89.4 |
| Os01t0911200-01 | Rice | plasma membrane | 85.9 | 84.67 |
| OQU88089 | Sorghum | plasma membrane | 84.45 | 83.84 |
| Zm00001d012086_P004 | Maize | plasma membrane | 82.56 | 82.2 |
| Zm00001d042398_P001 | Maize | mitochondrion, plasma membrane | 76.6 | 69.89 |
| GSMUA_Achr4P29530_001 | Banana | plasma membrane | 64.24 | 63.14 |
| KRH67412 | Soybean | plasma membrane | 59.59 | 59.68 |
| KRG95690 | Soybean | endoplasmic reticulum | 59.3 | 59.3 |
| KRH32199 | Soybean | endoplasmic reticulum | 58.43 | 58.35 |
| CDX82806 | Canola | plasma membrane | 55.67 | 55.99 |
| Solyc07g014700.2.1 | Tomato | nucleus | 52.76 | 55.85 |
| AT4G21150.1 | Thale cress | plasma membrane | 55.96 | 55.72 |
| CDX79039 | Canola | plasma membrane | 55.38 | 55.62 |
| CDY58482 | Canola | plasma membrane | 55.67 | 54.87 |
| GSMUA_Achr10P... | Banana | plasma membrane | 58.87 | 54.66 |
| CDX94025 | Canola | plasma membrane | 55.52 | 54.49 |
| VIT_07s0005g03640.t01 | Wine grape | plasma membrane | 58.72 | 53.44 |
| Bra013507.1-P | Field mustard | plasma membrane | 52.76 | 52.16 |
| Solyc05g046330.2.1 | Tomato | endoplasmic reticulum, nucleus | 56.54 | 52.14 |
| CDY65340 | Canola | plasma membrane | 52.47 | 50.77 |
| Bra038784.1-P | Field mustard | plasma membrane | 55.96 | 50.66 |
Protein Annotations
| MapMan:18.1.1.5.6 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008250 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030312 | PFAM:PF05817 |
| PANTHER:PTHR12640 | SignalP:SignalP-noTM | InterPro:Swp1 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G417000 | EnsemblPlants:TraesCS3A01G417000.2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:659392845..659398797
Molecular Weight (calculated)
74539.0 Da
IEP (calculated)
6.409
GRAVY (calculated)
0.154
Length
688 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWRLPPLAV LLLLVAAAVA PLSSAVRPVS EAHRSVAAEL FAASPDDLET TYEAVRTFKI LGVQRDKGLD GKACKLAADR LSSSSSPAKD LFHAVQIAGV
101: LACSVDAGVY DDVASRLKAV IKDTNSLLEF YYSVGGLLSL KEQGHSVVLS DADSTFHAIK ALSQSDGRWR YDTNSAESST FAAGIALEAL AGVVSLSDAE
201: VDPSMIGVVK NDIVKLFGTI KSYDDGTFYF DEKYVDGSEY KGPITTSASV VRGVTSFANV VSGKLNIPGE KILGLAKFFL GIGLPGSGKD CINQIESLSL
301: LENNRIFVPL ILSLPSKVLS LTSKDQLKVE VTTVFGSAAP PLRVDLVQVL GSDSKVITTD SKELQFDLDN NVHYLDITPL KIDVGKYSLV FEITLQDSEH
401: ETVYTTGGRN TESVVVTGLI KVDKAEIGIS ENDAGSAESV EKLDLLKDTK VSLSANHLQK LRLSFQLSTP LGRTFKPHQV FLKLKHESKV EHLFVVPGSA
501: RQFKIVLDFL GLVEKFYYLS GTYDLELSVG DASMENSFLR ALGQLELDLP EAPEKAPRPP AQAVDPLAKF RPQKEIEHIF RVPEKRPPQE VSLAFTGLTL
601: LPFIGFLIGL MRLGVNLKNF PSLPGPAAFA SLFHAGIGAV LLLYVLFWVK LDLFTTLKYL SFLGVFLVFV GHRTLSHLSN TAAKQKTA
101: LACSVDAGVY DDVASRLKAV IKDTNSLLEF YYSVGGLLSL KEQGHSVVLS DADSTFHAIK ALSQSDGRWR YDTNSAESST FAAGIALEAL AGVVSLSDAE
201: VDPSMIGVVK NDIVKLFGTI KSYDDGTFYF DEKYVDGSEY KGPITTSASV VRGVTSFANV VSGKLNIPGE KILGLAKFFL GIGLPGSGKD CINQIESLSL
301: LENNRIFVPL ILSLPSKVLS LTSKDQLKVE VTTVFGSAAP PLRVDLVQVL GSDSKVITTD SKELQFDLDN NVHYLDITPL KIDVGKYSLV FEITLQDSEH
401: ETVYTTGGRN TESVVVTGLI KVDKAEIGIS ENDAGSAESV EKLDLLKDTK VSLSANHLQK LRLSFQLSTP LGRTFKPHQV FLKLKHESKV EHLFVVPGSA
501: RQFKIVLDFL GLVEKFYYLS GTYDLELSVG DASMENSFLR ALGQLELDLP EAPEKAPRPP AQAVDPLAKF RPQKEIEHIF RVPEKRPPQE VSLAFTGLTL
601: LPFIGFLIGL MRLGVNLKNF PSLPGPAAFA SLFHAGIGAV LLLYVLFWVK LDLFTTLKYL SFLGVFLVFV GHRTLSHLSN TAAKQKTA
001: MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A
Arabidopsis Description
RPN2Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z16]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.