CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82806	Canola	plasma membrane	82.56	85.82
CDX79039	Canola	plasma membrane	82.42	85.55
AT4G21150.1	Thale cress	plasma membrane	80.45	82.78
CDY58482	Canola	plasma membrane	81.01	82.52
CDX94025	Canola	plasma membrane	81.01	82.17
KRH67412	Soybean	plasma membrane	56.96	58.95
KRH32199	Soybean	endoplasmic reticulum	56.54	58.35
KRG95690	Soybean	endoplasmic reticulum	56.4	58.28
Solyc07g014700.2.1	Tomato	nucleus	50.91	55.69
VIT_07s0005g03640.t01	Wine grape	plasma membrane	57.95	54.5
Zm00001d012086_P004	Maize	plasma membrane	52.6	54.12
OQU88089	Sorghum	plasma membrane	52.6	53.97
Os01t0911200-01	Rice	plasma membrane	52.46	53.44
GSMUA_Achr4P29530_001	Banana	plasma membrane	51.9	52.71
TraesCS3D01G412500.1	Wheat	golgi	50.91	52.62
TraesCS3A01G417000.2	Wheat	golgi	50.77	52.47
Solyc05g046330.2.1	Tomato	endoplasmic reticulum, nucleus	53.31	50.8
HORVU3Hr1G092660.1	Barley	plasma membrane	50.91	47.95
GSMUA_Achr10P...	Banana	plasma membrane	48.8	46.83
Zm00001d042398_P001	Maize	mitochondrion, plasma membrane	48.95	46.15

Protein Annotations

KEGG:00510+2.4.99.18	KEGG:00513+2.4.99.18	MapMan:18.1.1.5.6	GO:A0A078JFW0	UniProt:A0A078JFW0	EnsemblPlants:CDY65340
ProteinID:CDY65340	ProteinID:CDY65340.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152
GO:GO:0008250	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00045647001	PFAM:PF05817	PANTHER:PTHR12640	SignalP:SignalP-noTM	InterPro:Swp1	TMHMM:TMhelix
UniPathway:UPA00378	UniParc:UPI0004EDBCA7	SEG:seg	:	:	:

Description

BnaC03g64370DBnaC03g64370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFW0]

Coordinates

chrLK034746:+:7977..12899

Molecular Weight (calculated)

77190.6 Da

IEP (calculated)

8.132

GRAVY (calculated)

0.197

Length

711 amino acids

Sequence
(BLAST)

001: MAGGLVRYLV LILAVAICGA ASLFHPISNF HRSAALDVFV PVDGSYKSLE EAYEALKTLE ILGVDRKSDF KSATCENVVE VLASPSSTLK DAFFALSVNG
101: IMRCKSGEDV PKDIVSKLQA GVKDAKLLLD FYYSVRGLVL VKEQFSGNDI SFGDAEAIFL SIKALSQSDG RWRYSSNNPE SSSFAAGKLS LSKLLIDQSL
201: IQTLKTSILK LFDSIQKYDD GTFYFDGSEG PISTTASVIR GLTSFAAAES TRLNLAVDNI VGLAKFFLGV GIPGDAKDFF NQIDALAFEL SDTRTVRLTV
301: TYVFHVKYSE GLAVLHPRIL NKMMAAKMIS VRCSTHLVSS IYCHFSAKKE PLKVKVSTVL GSKAPALNVN LAQALCSGSK GSVINNQELK FDADSATYFL
401: DSFPKNFDVG KYTFVFEILL DELAHEKVYI TEAQTKVPIA ATGAISIENA EISVLDSDVG SVESQKKLDL TKDGAVSLSA NHLQKLRLSY QLTTPPGHVF
501: KPHQAFIKLK HESQVEHVFL VKASGKKSEL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAP RPPLQPTDPY SRYGPKAEIS
601: HIFRVPEKLP AKQLSLVFLG LIVLPFTGFL IGVGLLSLLT RLGVNIKSFP SLVGAATSAL LFHGGIGAVL LLYLDLFTTL KALSLLGVFL LFVGHSTLSH
701: LASASNKLKS A

Best Arabidopsis Sequence Match ( AT4G21150.3 )
(BLAST)

001: MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A

Arabidopsis Description

RPN2Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.