CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58482	Canola	plasma membrane	95.15	95.56
CDX79039	Canola	plasma membrane	89.02	91.09
CDX82806	Canola	plasma membrane	88.73	90.94
AT4G21150.1	Thale cress	plasma membrane	86.73	87.99
CDY65340	Canola	plasma membrane	82.17	81.01
KRH32199	Soybean	endoplasmic reticulum	62.91	64.01
KRH67412	Soybean	plasma membrane	62.62	63.9
KRG95690	Soybean	endoplasmic reticulum	62.48	63.66
Solyc07g014700.2.1	Tomato	nucleus	55.92	60.31
VIT_07s0005g03640.t01	Wine grape	plasma membrane	63.34	58.73
GSMUA_Achr4P29530_001	Banana	plasma membrane	57.63	57.71
Zm00001d012086_P004	Maize	plasma membrane	56.63	57.45
OQU88089	Sorghum	plasma membrane	56.06	56.71
Os01t0911200-01	Rice	plasma membrane	56.06	56.3
TraesCS3D01G412500.1	Wheat	golgi	54.64	55.67
TraesCS3A01G417000.2	Wheat	golgi	54.49	55.52
Solyc05g046330.2.1	Tomato	endoplasmic reticulum, nucleus	57.77	54.29
HORVU3Hr1G092660.1	Barley	plasma membrane	54.64	50.73
GSMUA_Achr10P...	Banana	plasma membrane	51.93	49.12
Zm00001d042398_P001	Maize	mitochondrion, plasma membrane	51.5	47.88

Protein Annotations

KEGG:00510+2.4.99.18	KEGG:00513+2.4.99.18	MapMan:18.1.1.5.6	GO:A0A078DXL5	EnsemblPlants:CDX94025	ProteinID:CDX94025
ProteinID:CDX94025.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005975	GO:GO:0006464	GO:GO:0006487	GO:GO:0008150	GO:GO:0008152	GO:GO:0008250
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00156909001
PFAM:PF05817	PANTHER:PTHR12640	SignalP:SignalP-noTM	InterPro:Swp1	TMHMM:TMhelix	UniPathway:UPA00378
UniParc:UPI0004EE0E94	SEG:seg	:	:	:	:

Description

BnaC07g36590D

Coordinates

chrLK031879:+:166096..170857

Molecular Weight (calculated)

75776.7 Da

IEP (calculated)

6.958

GRAVY (calculated)

0.216

Length

701 amino acids

Sequence
(BLAST)

001: MARCLARFLV SLLALAICNA ASVSHPISDS HRSAALDVFV PLDGSYKSLE EAYEALKSLE ILGIDKKSDL SSGTCENVVK VLASPSSALK DVFYALSVNG
101: ILKCKTGEDV PKDIVSKLQA GAKDAKLLLD FYYSIRGLVL VKEQFSGTDL TLGDAEAIFR SVKALSQSDG RWRYSSNNAE SSTFAAGLAF ETLAGVISLA
201: PSEIDQSLIQ TVKTGILKLF DSIQKYDDGT FYFDGSEGPI STTASVIRGL TSFAASESTG LNLPGDKIVG LAKFFLGVGI PGDAKDFFNQ IDALACLEDN
301: RQGYFHAIYL FSVPLILSLP STVISLTKKE PLKVKVSTVL GSKAPALSVK LAEALNSKGS SVINNQELKF DADSATYFLD SFPKNFDVGK YTFVFEILLD
401: ESANEKGYIT EAQTKVPIAA TGAIGIENAE IAVLDSDVGS IESQKKLDLT KDGVVSLSAN HLQKLRLSFQ LTTPLGLVFK PHQAFLKLKH ESQVEHIFLV
501: KTYGKKAELV LDFLGLVEKL YYLSGKYEIQ LTIGDASMEN SLLSNIGHIE LDLPERPEKA PLPPLHPTDP YSRYGPKSEI SHIFRVPEKL PAKQLSLIFL
601: GLIVLPFIAF LIGLTRLGVN IKSFPSSVGA ATSALLFHGG IGAVLLLYVL FWLKASSQNR FLLLDLFTTL KALSLLGVFL LFVGHRTLSN LAAASNKLKS
701: A

Best Arabidopsis Sequence Match ( AT4G21150.3 )
(BLAST)

001: MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A

Arabidopsis Description

RPN2Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.