Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82806 | Canola | plasma membrane | 96.2 | 96.34 |
| Bra013507.1-P | Field mustard | plasma membrane | 95.33 | 93.82 |
| AT4G21150.1 | Thale cress | plasma membrane | 90.36 | 89.58 |
| CDX94025 | Canola | plasma membrane | 91.09 | 89.02 |
| CDY58482 | Canola | plasma membrane | 90.36 | 88.68 |
| CDY65340 | Canola | plasma membrane | 85.55 | 82.42 |
| KRH67412 | Soybean | plasma membrane | 63.8 | 63.61 |
| KRH32199 | Soybean | endoplasmic reticulum | 63.8 | 63.43 |
| KRG95690 | Soybean | endoplasmic reticulum | 63.36 | 63.08 |
| Solyc07g014700.2.1 | Tomato | nucleus | 57.66 | 60.77 |
| VIT_07s0005g03640.t01 | Wine grape | plasma membrane | 65.26 | 59.13 |
| GSMUA_Achr4P29530_001 | Banana | plasma membrane | 58.69 | 57.43 |
| Zm00001d012086_P004 | Maize | plasma membrane | 57.81 | 57.31 |
| OQU88089 | Sorghum | plasma membrane | 57.52 | 56.85 |
| Os01t0911200-01 | Rice | plasma membrane | 57.23 | 56.16 |
| TraesCS3D01G412500.1 | Wheat | golgi | 55.77 | 55.52 |
| TraesCS3A01G417000.2 | Wheat | golgi | 55.62 | 55.38 |
| Solyc05g046330.2.1 | Tomato | endoplasmic reticulum, nucleus | 59.71 | 54.83 |
| HORVU3Hr1G092660.1 | Barley | plasma membrane | 55.77 | 50.6 |
| GSMUA_Achr10P... | Banana | plasma membrane | 54.01 | 49.93 |
| Zm00001d042398_P001 | Maize | mitochondrion, plasma membrane | 52.55 | 47.75 |
Protein Annotations
| KEGG:00510+2.4.99.18 | KEGG:00513+2.4.99.18 | MapMan:18.1.1.5.6 | GO:A0A078CSQ2 | EnsemblPlants:CDX79039 | ProteinID:CDX79039 |
| ProteinID:CDX79039.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006487 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008250 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00131570001 |
| PFAM:PF05817 | PANTHER:PTHR12640 | SignalP:SignalP-noTM | InterPro:Swp1 | TMHMM:TMhelix | UniPathway:UPA00378 |
| UniParc:UPI0004EE605C | SEG:seg | : | : | : | : |
Description
BnaA01g11060D
Coordinates
chrLK031816:+:1456626..1461755
Molecular Weight (calculated)
73927.3 Da
IEP (calculated)
6.659
GRAVY (calculated)
0.187
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAGGLARFV VLILATAICG AASVFQPISD SHRSAALDVF APVDGSYKSL DEAYEALKTL EILGIDKKSD LSSATCENVV KVLASPSSST LKDVFYALSV
101: NGILKCKSGE DVPKDIVSKL QTGVKDAKLL LDFYYSVRGL VLVKEQFSGT DISLGDAEAV FRSIKALSQS DGKWRYSPNN PESSTFAAGL AFETLAGVIS
201: LAPSEIDHSL IQTLKTGITK LFDSIQKYDD GTFYFDESEG PISTTASVIR GLKSFAASES TGLNLPGDRI VGLAKFFLGV GIPGDAKDFF NQIDALACLE
301: DNRFSVPLIL SLPSTVISLT KKEPLKVKVS TVFGSKAPAL SVKLSQALSS GSKGSSVINN QELKFDAESA TYFLESFPKN FDVGKYTFVF EILLDESANE
401: KVYITEAQTK VPISATGAIT IENAEIAVLD SDVGSVESQK KLDLTKDEAV SLSANHLQKL RLSLQLTTPL GHVFKPHQAF LKLKHESQVE HIFLVKTSGK
501: KSELVLDFLG LVEKLYYLSG KYEIQLTIGD ASMENSLLSN IGHIELDLPE RPEKAARPPL QPTDPYSRYV PKAEISHIFR VPEKLPAKQL SLVFLGVIVL
601: PFIGFLIGLT RLGVNIKSFP SSVGAATSAL LFHGGIGAVL LLYVLFWLDL FTTLKALSLL GVFLLFVGHR TLSHLAAASN KLKSA
101: NGILKCKSGE DVPKDIVSKL QTGVKDAKLL LDFYYSVRGL VLVKEQFSGT DISLGDAEAV FRSIKALSQS DGKWRYSPNN PESSTFAAGL AFETLAGVIS
201: LAPSEIDHSL IQTLKTGITK LFDSIQKYDD GTFYFDESEG PISTTASVIR GLKSFAASES TGLNLPGDRI VGLAKFFLGV GIPGDAKDFF NQIDALACLE
301: DNRFSVPLIL SLPSTVISLT KKEPLKVKVS TVFGSKAPAL SVKLSQALSS GSKGSSVINN QELKFDAESA TYFLESFPKN FDVGKYTFVF EILLDESANE
401: KVYITEAQTK VPISATGAIT IENAEIAVLD SDVGSVESQK KLDLTKDEAV SLSANHLQKL RLSLQLTTPL GHVFKPHQAF LKLKHESQVE HIFLVKTSGK
501: KSELVLDFLG LVEKLYYLSG KYEIQLTIGD ASMENSLLSN IGHIELDLPE RPEKAARPPL QPTDPYSRYV PKAEISHIFR VPEKLPAKQL SLVFLGVIVL
601: PFIGFLIGLT RLGVNIKSFP SSVGAATSAL LFHGGIGAVL LLYVLFWLDL FTTLKALSLL GVFLLFVGHR TLSHLAAASN KLKSA
001: MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A
Arabidopsis Description
RPN2Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z16]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.