Factsheet for Zm00001d042398_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
golgi 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88089	Sorghum	plasma membrane	79.44	86.44
Zm00001d012086_P004	Maize	plasma membrane	77.45	84.52
Os01t0911200-01	Rice	plasma membrane	72.81	78.65
TraesCS3A01G417000.2	Wheat	golgi	69.89	76.6
TraesCS3D01G412500.1	Wheat	golgi	69.76	76.45
HORVU3Hr1G092660.1	Barley	plasma membrane	70.95	70.86
GSMUA_Achr4P29530_001	Banana	plasma membrane	55.17	59.43
KRG95690	Soybean	endoplasmic reticulum	52.25	57.27
KRH67412	Soybean	plasma membrane	51.99	57.06
KRH32199	Soybean	endoplasmic reticulum	50.4	55.15
Solyc07g014700.2.1	Tomato	nucleus	46.02	53.38
AT4G21150.1	Thale cress	plasma membrane	48.67	53.11
CDX79039	Canola	plasma membrane	47.75	52.55
CDX82806	Canola	plasma membrane	47.61	52.49
GSMUA_Achr10P...	Banana	plasma membrane	51.33	52.23
CDY58482	Canola	plasma membrane	48.01	51.86
CDX94025	Canola	plasma membrane	47.88	51.5
VIT_07s0005g03640.t01	Wine grape	plasma membrane	51.33	51.19
Solyc05g046330.2.1	Tomato	endoplasmic reticulum, nucleus	49.34	49.87
Bra013507.1-P	Field mustard	plasma membrane	45.62	49.43
CDY65340	Canola	plasma membrane	46.15	48.95
Bra038784.1-P	Field mustard	plasma membrane	48.14	47.76

Protein Annotations

MapMan:18.1.1.5.6	UniProt:A0A1D6N3I2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005975	GO:GO:0006464	GO:GO:0006487
GO:GO:0008150	GO:GO:0008152	GO:GO:0008250	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	ProteinID:ONM35256.1	PFAM:PF05817	PANTHER:PTHR12640
InterPro:Swp1	TMHMM:TMhelix	UniParc:UPI000843CEDE	EnsemblPlantsGene:Zm00001d042398	EnsemblPlants:Zm00001d042398_P001	EnsemblPlants:Zm00001d042398_T001
SEG:seg	:	:	:	:	:

Description

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

Coordinates

chr3:-:164486800..164493036

Molecular Weight (calculated)

81988.8 Da

IEP (calculated)

6.833

GRAVY (calculated)

0.179

Length

754 amino acids

Sequence
(BLAST)

001: MIWRNIYSRP LLTSRSGHSH MPQSPKPYTS LSATVIAIAM AGRRPAPVAI LLLLAAAFAP ISSAVRPVSD AHRSAAVELF APSADGSFGD LESTYEAVRT
101: FQILGLENYK SLSGKACKFA AENLASPGST TKDLFHAVRI SGALGCAVDA GVYDGVVARL KAVIQDTNSL LELYYPVGGL LGIKEQGHNV VLSDAEGTFH
201: ATKALSQSDG RWRYDTDSAE SSTFAAGIAL EALAGIVSLA DAAVDPSMMG VVKNDVVKLF DTIKSYNDGT FYFDEKHVDA TEYKGPIITS ASVVRGVTSF
301: AAVVSGKLNI PAEKILGLAK FFLGIGLPGS AKDCFNQIES LSFLENNRQG LRSVDTITFF QSIFIDFERS AQGDNYIHIL YSVAKGITFS VKMTYGAWDH
401: NLLTSDVFFL ITTLLCSNSL ASFSFLSQEL QYDLDNNVHY LDIAPLKIDV GKYSIVFEIS LQEPEQETVY ATGGRNTESV IVTGLIKVDK AEIGISDNDA
501: GAVESVQKLD LLKDTKVSLS ANHLQKLCLS FQLTTPLGHT FKPHQVFLKL RHESKVEHLF VVPGSARQFK IVLDFLGLVE KFYYLSGRYD LELTVGDAVM
601: ENSFLRPLGH LELDLPDAPE KAPRPPAQAV DPFSKFGPKA EISHIFRAPE KRPPKELSLA FTGLTLLPFI GFLIGLVRLG VNLKNFPSLP GPAAFASLFH
701: AGIGAVLMLY VLFWIKLDLF TTLKYLGFLG IFLVFVGHRA LSYLSSVSTK QKTA

Best Arabidopsis Sequence Match ( AT4G21150.1 )
(BLAST)

001: MMAGGNVRFL VLILAVAICG AASVFQPISD SHRSAALDVF VPVDGSYKSL EEAYEALKTL EILGIDKKSD LSSKTCENVV KVLQSSSSTL KDAFYALNVN
101: GILKCKIGEA GPKDIVSQLQ AGVKDAKLLL DFYYSVRGLV LAKEQFPGTH ISLGDAEAIF RSIKSLSQSD GRWRYSSNNP ESSTFAAGLA YETLAGVISL
201: APSEFDPSLI QSVKTGILKL SDSIQKYDDG TFYFDEKSVD ASQGPISTTA SVIRGLTSFA ASESTGLNLP GDKIVGLAKF FLGVGIPGDA KDFFNQIDAL
301: ACLEDNKFSV PLILSLPSTV ISLTKKEPLK VKVSTVLGSK APALSVKLTQ ALSSKSVDSS VINNQELKFD ADSATYFLDS FPKNFDIGKY TFVFKIVLDE
401: SAHEKVYITE AQTKVPIAAT GAISIENAEI AVLDSDIGSV ESQKKLDLTK DGAVSLSANH LQKLRLSFQL TTPLGNAFKP HQAFFKLKHE SQVEHIFLVK
501: TSGKKSELVL DFLGLVEKLY YLSGKYEIQL TIGDASMENS LLSNIGHIEL DLPERPEKAT RPPLQSTEPY SRYGPKAEIS HIFRIPEKLP AKQLSLVFLG
601: VIVLPFIGFL IGLTRLGVNI KSFPSSTGSA ISALLFHCGI GAVLLLYVLF WLKLDLFTTL KALSLLGVFL LFVGHRTLSQ LASASNKLKS A

Arabidopsis Description

RPN2Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.