Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1D01G018500.1 | cytosol |
| TraesCS5A01G019200.1 | cytosol, nucleus |
| TraesCS5A01G416500.2 | cytosol, nucleus |
| TraesCS5B01G016700.1 | cytosol, nucleus |
| TraesCS5B01G418800.1 | cytosol, nucleus |
| TraesCS5D01G024600.1 | cytosol, nucleus |
| TraesCS5D01G424200.1 | cytosol, nucleus |
| TraesCS6A01G083200.1 | cytosol |
| TraesCS6B01G113900.1 | cytosol |
| TraesCS6D01G077000.1 | cytosol |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 97.01 | 97.01 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 96.27 | 96.27 |
| TraesCS5D01G152500.1 | Wheat | golgi | 94.78 | 94.78 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 90.3 | 89.63 |
| Zm00001d041963_P001 | Maize | plasma membrane | 85.07 | 84.44 |
| EES02143 | Sorghum | cytosol | 84.33 | 83.7 |
| Zm00001d011786_P001 | Maize | plasma membrane | 84.33 | 83.7 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 77.61 | 77.61 |
| PGSC0003DMT400051945 | Potato | cytosol | 73.88 | 75.0 |
| Bra022898.1-P | Field mustard | cytosol | 74.63 | 74.63 |
| Bra005564.1-P | Field mustard | cytosol | 74.63 | 74.63 |
| AT2G32720.1 | Thale cress | cytosol | 73.88 | 73.88 |
| CDY59638 | Canola | cytosol | 73.88 | 73.88 |
| CDY23792 | Canola | cytosol | 73.88 | 73.88 |
| CDX84725 | Canola | cytosol | 73.88 | 73.88 |
| CDX79471 | Canola | cytosol | 73.88 | 73.88 |
| VIT_07s0005g06290.t01 | Wine grape | cytosol | 73.13 | 73.68 |
| KRG99574 | Soybean | cytosol, endoplasmic reticulum | 73.88 | 73.33 |
| CDY19161 | Canola | cytosol | 73.13 | 73.13 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 73.13 | 73.13 |
| Bra021809.1-P | Field mustard | cytosol | 73.13 | 73.13 |
| PGSC0003DMT400045531 | Potato | cytosol | 72.39 | 72.93 |
| KRH66053 | Soybean | endoplasmic reticulum | 72.39 | 71.85 |
| PGSC0003DMT400003091 | Potato | cytosol | 70.9 | 70.37 |
| Bra037461.1-P | Field mustard | cytosol | 67.16 | 65.22 |
| CDX85364 | Canola | cytosol | 67.16 | 65.22 |
| CDX86279 | Canola | cytosol | 67.16 | 65.22 |
| Bra036160.1-P | Field mustard | cytosol | 66.42 | 63.57 |
| CDY19937 | Canola | cytosol | 66.42 | 63.57 |
| CDY12180 | Canola | cytosol | 73.88 | 63.46 |
| KRG99780 | Soybean | cytosol | 64.93 | 63.04 |
| CDY00045 | Canola | cytosol | 65.67 | 62.86 |
| AT5G48810.1 | Thale cress | cytosol | 63.43 | 60.71 |
| KRH46744 | Soybean | endoplasmic reticulum | 64.18 | 60.56 |
| Solyc06g053180.2.1 | Tomato | plastid | 30.6 | 48.24 |
| TraesCS6B01G284000.1 | Wheat | cytosol | 44.03 | 41.55 |
| PGSC0003DMT400019916 | Potato | cytosol | 41.79 | 39.44 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 69.4 | 37.96 |
| TraesCS7B01G336600.1 | Wheat | cytosol | 40.3 | 36.24 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 55.97 | 35.38 |
| TraesCS5B01G396800.1 | Wheat | cytosol | 35.07 | 34.81 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 22.39 | 25.42 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G138200.1 | EnsemblPlantsGene:TraesCS5B01G138200 | Gene3D:3.10.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF66 | PFAM:PF00173 | PFscan:PS50255 | PRINTS:PR00363 | ScanProsite:PS00191 | SMART:SM01117 |
| SUPFAM:SSF55856 | TMHMM:TMhelix | MapMan:21.9.1.7.1.3 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:262304431..262306448
Molecular Weight (calculated)
14897.7 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.238
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKAALTLEE VSKHNTKDDC WLIIAGKVYD VTKFLEDHPG GDDVLLSSTA KDATDDFEDV GHSTTARAML DEYYVGDMDA TTIPARTKYT LPKQPHYNQD
101: KTPEFIIKIL QFLVPLAILG LAVAIRMYTK SESA
101: KTPEFIIKIL QFLVPLAILG LAVAIRMYTK SESA
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.