Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 100.0 | 100.0 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 100.0 | 100.0 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 95.76 | 95.76 |
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 80.51 | 80.51 |
| Os09t0334600-00 | Rice | mitochondrion | 58.47 | 78.41 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 49.15 | 69.05 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 60.17 | 59.66 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 49.15 | 59.18 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 59.32 | 57.85 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 59.32 | 57.38 |
| Bra031489.1-P | Field mustard | extracellular, golgi, vacuole | 58.47 | 57.02 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 58.47 | 57.02 |
| CDY46984 | Canola | endoplasmic reticulum | 58.47 | 52.27 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 61.86 | 50.0 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 34.75 | 48.81 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 61.86 | 47.71 |
| CDY44610 | Canola | endoplasmic reticulum | 33.9 | 47.62 |
| Bra027144.1-P | Field mustard | nucleus | 45.76 | 26.87 |
| TraesCS6B01G284000.1 | Wheat | cytosol | 29.66 | 24.65 |
| TraesCS5B01G396800.1 | Wheat | cytosol | 26.27 | 22.96 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 25.42 | 22.39 |
| TraesCS7B01G336600.1 | Wheat | cytosol | 27.97 | 22.15 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 26.27 | 14.62 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G183900.1 | EnsemblPlantsGene:TraesCS5B01G183900 | Gene3D:3.10.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF63 | PFAM:PF00173 | PFscan:PS50255 | PRINTS:PR00363 | ScanProsite:PS00191 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:334685278..334688179
Molecular Weight (calculated)
12871.3 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.165
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIIILISLV VLLVLGALFV IPRSKNKGEG KDARSAGNGT TSTSYSKKEV STHNTRKDCW IIIKDKVYDV TPYVEEHPGG DAILNNAGGD STEGFFGPQH
101: GTRVFDIIED FCIGKLED
101: GTRVFDIIED FCIGKLED
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.