CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008470.1.1	Tomato	mitochondrion	54.62	77.38
VIT_09s0002g03420.t01	Wine grape	cytosol	60.5	73.47
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	92.44	71.9
Os09t0334600-00	Rice	mitochondrion	48.74	65.91
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	63.87	62.3
CDY24550	Canola	extracellular, golgi, vacuole	63.03	61.98
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	62.18	61.16
AT1G60660.1	Thale cress	endoplasmic reticulum	61.34	60.33
TraesCS5A01G185800.1	Wheat	endoplasmic reticulum, extracellular	59.66	60.17
TraesCS5B01G183900.1	Wheat	endoplasmic reticulum, extracellular	59.66	60.17
TraesCS5D01G190900.1	Wheat	endoplasmic reticulum, extracellular	59.66	60.17
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	58.82	59.32
EER98759	Sorghum	endoplasmic reticulum, extracellular	58.82	59.32
CDY46984	Canola	endoplasmic reticulum	63.03	56.82
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	56.3	56.3
OQU80382	Sorghum	extracellular, vacuole	53.78	54.24
Zm00001d032266_P001	Maize	endoplasmic reticulum, extracellular	52.1	52.54
CDY61511	Canola	endoplasmic reticulum, golgi	35.29	50.0
CDY44610	Canola	endoplasmic reticulum	34.45	48.81
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	54.62	44.52
Bra027144.1-P	Field mustard	nucleus	46.22	27.36
KRH53553	Soybean	cytosol	26.05	25.62
KRH66053	Soybean	endoplasmic reticulum	28.57	25.19
KRH64355	Soybean	endoplasmic reticulum	29.41	25.0
KRG99574	Soybean	cytosol, endoplasmic reticulum	27.73	24.44
KRH46744	Soybean	endoplasmic reticulum	28.57	23.94
KRG99780	Soybean	cytosol	27.73	23.91
KRH68944	Soybean	cytosol	27.73	23.4
KRG97223	Soybean	endoplasmic reticulum	27.73	23.4
KRH47845	Soybean	endoplasmic reticulum	27.73	23.24
KRH06410	Soybean	cytosol	27.73	22.6
KRH53581	Soybean	endoplasmic reticulum	31.09	18.97
KRH52065	Soybean	cytosol	21.01	18.25
KRH61382	Soybean	cytosol	21.01	17.99

Protein Annotations

EntrezGene:100790330	Gene3D:3.10.120.10	MapMan:35.1	EMBL:ACUP02000011	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BS	EnsemblPlantsGene:GLYMA_01G008000	GO:GO:0003674	GO:GO:0005488	GO:GO:0020037	GO:GO:0046872
UniProt:I1J4J0	InterPro:IPR001199	InterPro:IPR036400	EnsemblPlants:KRH74256	ProteinID:KRH74256	ProteinID:KRH74256.1
PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF65
SMART:SM01117	SUPFAM:SSF55856	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002336FAF	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:779555..783740

Molecular Weight (calculated)

13305.9 Da

IEP (calculated)

6.797

GRAVY (calculated)

-0.145

Length

119 amino acids

Sequence
(BLAST)

001: MVLLVGLTLL LGLFLAVLLF NPRHRKSGHK AKAQASLNVD KASKSYSKTE VSLHNKRTDC WIIIKNKVYD VTSYVEEHPG GDSILVHAGD DSTEGFFGPQ
101: HATRVFDMIE DFYIGDLEQ

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.