CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032266_P001	Maize	endoplasmic reticulum, extracellular	91.53	91.53
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	79.66	78.99
EER98759	Sorghum	endoplasmic reticulum, extracellular	75.42	75.42
Solyc12g008470.1.1	Tomato	mitochondrion	45.76	64.29
VIT_09s0002g03420.t01	Wine grape	cytosol	50.0	60.2
CDY24550	Canola	extracellular, golgi, vacuole	55.93	54.55
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	55.93	54.1
KRH74256	Soybean	endoplasmic reticulum, golgi	54.24	53.78
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	55.08	53.72
AT1G60660.1	Thale cress	endoplasmic reticulum	53.39	52.07
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	64.41	52.05
CDY46984	Canola	endoplasmic reticulum	54.24	48.48
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	57.63	44.44
CDY61511	Canola	endoplasmic reticulum, golgi	30.51	42.86
CDY44610	Canola	endoplasmic reticulum	29.66	41.67
EER91363	Sorghum	cytosol	33.05	29.1
Bra027144.1-P	Field mustard	nucleus	46.61	27.36
EES17559	Sorghum	cytosol	27.97	24.81
EER93435	Sorghum	cytosol	26.27	23.31
EES15848	Sorghum	cytosol	28.81	23.13
EES02143	Sorghum	cytosol	24.58	21.48
OQU85747	Sorghum	mitochondrion	29.66	16.36

Protein Annotations

Gene3D:3.10.120.10	MapMan:35.1	EntrezGene:8070016	UniProt:C5YKM1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BS	ProteinID:EES14944.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0020037	GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400	EnsemblPlants:OQU80382
ProteinID:OQU80382	ProteinID:OQU80382.1	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255
PANTHER:PTHR19359	PANTHER:PTHR19359:SF63	SMART:SM01117	EnsemblPlantsGene:SORBI_3007G118400	SUPFAM:SSF55856	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0001A87A14	RefSeq:XP_002445449.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:51194588..51198614

Molecular Weight (calculated)

12800.4 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.092

Length

118 amino acids

Sequence
(BLAST)

001: MEVIVIISVV ILLALGALFV IPKSQNKGKS KGTDSGAGMT SRSFTKEEIS KHNTRKDCWI IIKDKVYDVT PYVEEHPGGD AILNNAGGDS TEGFFGPQHG
101: TRVFDIIEDF CIGQLKAS

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.