Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44610 | Canola | endoplasmic reticulum | 97.62 | 97.62 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 91.67 | 63.64 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 91.67 | 63.11 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 78.57 | 54.55 |
| CDY46984 | Canola | endoplasmic reticulum | 76.19 | 48.48 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 40.48 | 40.48 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 50.0 | 35.29 |
| Os09t0334600-00 | Rice | mitochondrion | 36.9 | 35.23 |
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 48.81 | 34.75 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 48.81 | 34.75 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 48.81 | 34.75 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 46.43 | 33.05 |
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 44.05 | 31.36 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 35.71 | 30.61 |
| OQU80382 | Sorghum | extracellular, vacuole | 42.86 | 30.51 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 42.86 | 30.25 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 40.48 | 28.81 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 48.81 | 26.8 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 45.24 | 26.03 |
| CDY47078 | Canola | nucleus | 28.57 | 20.34 |
| CDY16153 | Canola | cytosol | 30.95 | 19.26 |
| CDX85016 | Canola | cytosol | 30.95 | 19.26 |
| CDY47080 | Canola | cytosol | 26.19 | 16.42 |
| CDX79471 | Canola | cytosol | 25.0 | 15.67 |
| CDY59638 | Canola | cytosol | 25.0 | 15.67 |
| CDY23792 | Canola | cytosol | 25.0 | 15.67 |
| CDY19161 | Canola | cytosol | 25.0 | 15.67 |
| CDY61721 | Canola | cytosol | 23.81 | 14.93 |
| CDY28830 | Canola | cytosol | 23.81 | 14.93 |
| CDY27310 | Canola | cytosol | 23.81 | 14.93 |
| CDX96233 | Canola | cytosol | 23.81 | 14.93 |
| CDX84725 | Canola | cytosol | 23.81 | 14.93 |
| CDY19937 | Canola | cytosol | 22.62 | 13.57 |
| CDY00045 | Canola | cytosol | 22.62 | 13.57 |
| CDY14370 | Canola | cytosol | 25.0 | 13.46 |
| CDY12180 | Canola | cytosol | 25.0 | 13.46 |
| CDY41545 | Canola | cytosol | 21.43 | 13.43 |
| CDX86279 | Canola | cytosol | 21.43 | 13.04 |
| CDX85364 | Canola | cytosol | 21.43 | 13.04 |
| CDX80035 | Canola | cytosol | 20.24 | 12.69 |
| CDY20247 | Canola | mitochondrion | 26.19 | 11.58 |
Protein Annotations
| EnsemblPlants:CDY61511 | EnsemblPlantsGene:GSBRNA2T00033972001 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:IPR001199 |
| InterPro:IPR036400 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF65 | PFAM:PF00173 | PFscan:PS50255 | ProteinID:CDY61511 |
| ProteinID:CDY61511.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0004EB74D6 |
| UniProt:A0A078JBM8 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng37950DBnaCnng37950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBM8]
Coordinates
chrLK034006:+:34051..34305
Molecular Weight (calculated)
9425.3 Da
IEP (calculated)
9.087
GRAVY (calculated)
-0.420
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MIAVIGLLLV FLVSALFLIQ GKRRSNGGQD KKQSSNEPKD SKPKSYSKSE VAEHNKRDDC WIIIKDKVYD VTSYVEEHLG GAPF
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.