Factsheet for Zm00001d032266_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80382	Sorghum	extracellular, vacuole	91.53	91.53
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	77.12	76.47
Solyc12g008470.1.1	Tomato	mitochondrion	44.07	61.9
VIT_09s0002g03420.t01	Wine grape	cytosol	47.46	57.14
CDY24550	Canola	extracellular, golgi, vacuole	54.24	52.89
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	54.24	52.46
KRH74256	Soybean	endoplasmic reticulum, golgi	52.54	52.1
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	53.39	52.07
AT1G60660.1	Thale cress	endoplasmic reticulum	51.69	50.41
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	61.86	50.0
CDY46984	Canola	endoplasmic reticulum	53.39	47.73
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	55.93	43.14
CDY61511	Canola	endoplasmic reticulum, golgi	28.81	40.48
CDY44610	Canola	endoplasmic reticulum	27.97	39.29
Bra027144.1-P	Field mustard	nucleus	44.92	26.37
Zm00001d017425_P001	Maize	cytosol	30.51	25.9
Zm00001d034048_P003	Maize	cytosol	26.27	22.14
Zm00001d011081_P001	Maize	plasma membrane, plastid	24.58	21.8
Zm00001d041963_P001	Maize	plasma membrane	24.58	21.48
Zm00001d013839_P001	Maize	plasma membrane	32.2	20.88
Zm00001d011786_P001	Maize	plasma membrane	23.73	20.74
Zm00001d032442_P002	Maize	cytosol	23.73	20.14
Zm00001d023978_P001	Maize	cytosol	21.19	19.08
Zm00001d013257_P002	Maize	plastid	23.73	18.67
Zm00001d035685_P001	Maize	mitochondrion	19.49	14.84

Protein Annotations

Gene3D:3.10.120.10	MapMan:35.1	UniProt:A0A1D6KPJ2	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS
GO:GO:0003674	GO:GO:0005488	GO:GO:0020037	GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400
ProteinID:ONM04724.1	ProteinID:ONM04727.1	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255
PANTHER:PTHR19359	PANTHER:PTHR19359:SF63	SMART:SM01117	SUPFAM:SSF55856	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000221CD86	EnsemblPlantsGene:Zm00001d032266	EnsemblPlants:Zm00001d032266_P001	EnsemblPlants:Zm00001d032266_T001	SEG:seg	:

Description

Cytochrome b5

Coordinates

chr1:-:219764889..219772132

Molecular Weight (calculated)

12882.4 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.081

Length

118 amino acids

Sequence
(BLAST)

001: MDIIIIISLV ILLALGALFV IPKSQNKGKS KRNDLGAGTT SRSFTTEEIS KHSTRKDCWI IIKDKVYDVT PYVEEHPGGD AILNNAGGDS TEGFFGPQHG
101: TRVFDIIEDF CIGQLKAS

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.