CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61511	Canola	endoplasmic reticulum, golgi	97.62	97.62
CDY24550	Canola	extracellular, golgi, vacuole	89.29	61.98
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	89.29	61.48
AT1G60660.1	Thale cress	endoplasmic reticulum	77.38	53.72
CDY46984	Canola	endoplasmic reticulum	75.0	47.73
Solyc12g008470.1.1	Tomato	mitochondrion	40.48	40.48
Os09t0334600-00	Rice	mitochondrion	36.9	35.23
KRH74256	Soybean	endoplasmic reticulum, golgi	48.81	34.45
TraesCS5D01G190900.1	Wheat	endoplasmic reticulum, extracellular	47.62	33.9
TraesCS5B01G183900.1	Wheat	endoplasmic reticulum, extracellular	47.62	33.9
TraesCS5A01G185800.1	Wheat	endoplasmic reticulum, extracellular	47.62	33.9
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	45.24	32.2
VIT_09s0002g03420.t01	Wine grape	cytosol	35.71	30.61
EER98759	Sorghum	endoplasmic reticulum, extracellular	42.86	30.51
OQU80382	Sorghum	extracellular, vacuole	41.67	29.66
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	41.67	29.41
Zm00001d032266_P001	Maize	endoplasmic reticulum, extracellular	39.29	27.97
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	47.62	26.14
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	42.86	24.66
CDY47078	Canola	nucleus	28.57	20.34
CDY16153	Canola	cytosol	30.95	19.26
CDX85016	Canola	cytosol	30.95	19.26
CDY47080	Canola	cytosol	26.19	16.42
CDX79471	Canola	cytosol	25.0	15.67
CDY59638	Canola	cytosol	25.0	15.67
CDY23792	Canola	cytosol	25.0	15.67
CDY19161	Canola	cytosol	25.0	15.67
CDY61721	Canola	cytosol	23.81	14.93
CDY28830	Canola	cytosol	23.81	14.93
CDY27310	Canola	cytosol	23.81	14.93
CDX84725	Canola	cytosol	23.81	14.93
CDX96233	Canola	cytosol	23.81	14.93
CDY19937	Canola	cytosol	22.62	13.57
CDY00045	Canola	cytosol	22.62	13.57
CDY14370	Canola	cytosol	25.0	13.46
CDY12180	Canola	cytosol	25.0	13.46
CDY41545	Canola	cytosol	21.43	13.43
CDX86279	Canola	cytosol	21.43	13.04
CDX85364	Canola	cytosol	21.43	13.04
CDX80035	Canola	cytosol	20.24	12.69
CDY20247	Canola	mitochondrion	27.38	12.11

Protein Annotations

EnsemblPlants:CDY44610	EnsemblPlantsGene:GSBRNA2T00080547001	Gene3D:3.10.120.10	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:IPR001199
InterPro:IPR036400	PANTHER:PTHR19359	PANTHER:PTHR19359:SF65	PFAM:PF00173	PFscan:PS50255	ProteinID:CDY44610
ProteinID:CDY44610.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI0004EE8632
UniProt:A0A078I194	MapMan:35.2	:	:	:	:

Description

BnaCnng11590DBnaCnng11590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I194]

Coordinates

chrLK032596:+:54775..55029

Molecular Weight (calculated)

9427.3 Da

IEP (calculated)

9.087

GRAVY (calculated)

-0.454

Length

84 amino acids

Sequence
(BLAST)

1: MIAAIGLLLV FLVSALFLIQ GKRRSNGSQD KKQSSNEPKD SKPKSYSKSE VAEHNKRDDC WIIIKDKVYD VTSYVEEHLG GAPF

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.