Factsheet for VIT_09s0002g03420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008470.1.1	Tomato	mitochondrion	65.31	76.19
Os09t0334600-00	Rice	mitochondrion	55.1	61.36
KRH74256	Soybean	endoplasmic reticulum, golgi	73.47	60.5
EER98759	Sorghum	endoplasmic reticulum, extracellular	64.29	53.39
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	65.31	52.89
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	65.31	52.46
CDY24550	Canola	extracellular, golgi, vacuole	64.29	52.07
AT1G60660.1	Thale cress	endoplasmic reticulum	63.27	51.24
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	60.2	50.0
OQU80382	Sorghum	extracellular, vacuole	60.2	50.0
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	60.2	49.58
TraesCS5D01G190900.1	Wheat	endoplasmic reticulum, extracellular	59.18	49.15
TraesCS5B01G183900.1	Wheat	endoplasmic reticulum, extracellular	59.18	49.15
TraesCS5A01G185800.1	Wheat	endoplasmic reticulum, extracellular	59.18	49.15
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	76.53	49.02
CDY46984	Canola	endoplasmic reticulum	64.29	47.73
Zm00001d032266_P001	Maize	endoplasmic reticulum, extracellular	57.14	47.46
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	65.31	43.84
CDY61511	Canola	endoplasmic reticulum, golgi	30.61	35.71
CDY44610	Canola	endoplasmic reticulum	30.61	35.71
VIT_07s0005g06290.t01	Wine grape	cytosol	37.76	27.82
Bra027144.1-P	Field mustard	nucleus	52.04	25.37
VIT_01s0011g00210.t01	Wine grape	cytosol	32.65	23.88
VIT_16s0098g01230.t01	Wine grape	cytosol	31.63	23.13
VIT_18s0001g09400.t01	Wine grape	mitochondrion	27.55	18.37

Protein Annotations

EntrezGene:100261728	wikigene:100261728	Gene3D:3.10.120.10	MapMan:35.1	ProteinID:CBI36051	ProteinID:CBI36051.3
InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	UniProt:D7U0A5	EMBL:FN596494	GO:GO:0003674
GO:GO:0005488	GO:GO:0020037	GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400	EntrezGene:LOC100261728
wikigene:LOC100261728	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359
PANTHER:PTHR19359:SF65	SMART:SM01117	SUPFAM:SSF55856	UniParc:UPI0001BE4761	ArrayExpress:VIT_09s0002g03420	EnsemblPlantsGene:VIT_09s0002g03420
EnsemblPlants:VIT_09s0002g03420.t01	unigene:Vvi.18835	RefSeq:XP_002283614	RefSeq:XP_002283614.1	SEG:seg	:

Description

No Description!

Coordinates

chr9:-:3091205..3096452

Molecular Weight (calculated)

10903.6 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.512

Length

98 amino acids

Sequence
(BLAST)

1: MLLYSDAGNS KTAQKSSTSK VSKTYTKAEI SLHNKKTDCW IIIKDKVYDV TSYVEEHPGG DAILAHAGDD STEGFFGPQH ATRVFDMIDD FYIGDLEH

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.