Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 55.48 | 68.64 |
| Os09t0334600-00 | Rice | mitochondrion | 40.41 | 67.05 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 38.36 | 66.67 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 43.84 | 65.31 |
| OQU80382 | Sorghum | extracellular, vacuole | 52.05 | 64.41 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 61.86 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 50.0 | 61.86 |
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 61.86 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 61.86 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 49.32 | 61.02 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 48.63 | 59.66 |
| Bra031489.1-P | Field mustard | extracellular, golgi, vacuole | 45.89 | 55.37 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 44.52 | 54.62 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 45.21 | 54.55 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 45.21 | 54.1 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 43.84 | 52.89 |
| CDY46984 | Canola | endoplasmic reticulum | 43.15 | 47.73 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 26.03 | 45.24 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 45.21 | 43.14 |
| CDY44610 | Canola | endoplasmic reticulum | 24.66 | 42.86 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 25.34 | 27.61 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 23.97 | 26.12 |
| Bra027144.1-P | Field mustard | nucleus | 35.62 | 25.87 |
| GSMUA_Achr2P13570_001 | Banana | cytosol | 22.6 | 24.81 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 21.92 | 24.06 |
| GSMUA_Achr6P28600_001 | Banana | cytosol, golgi, peroxisome | 19.86 | 21.48 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 23.97 | 21.47 |
| GSMUA_Achr11P... | Banana | cytosol | 19.18 | 21.21 |
| GSMUA_Achr3P16820_001 | Banana | cytosol | 19.86 | 21.01 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 19.86 | 19.46 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 16.44 | 15.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 21.92 | 13.06 |
Protein Annotations
| Gene3D:3.10.120.10 | MapMan:35.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr9G05320_001 | EnsemblPlants:GSMUA_Achr9P05320_001 | EnsemblPlants:GSMUA_Achr9T05320_001 | InterPro:IPR001199 | InterPro:IPR036400 | UniProt:M0TXP1 |
| PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF63 |
| SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000296CF84 | SEG:seg | : |
Description
cytochrome b5-like Heme/Steroid binding domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G05320_001]
Coordinates
chr9:+:3435361..3438364
Molecular Weight (calculated)
16268.9 Da
IEP (calculated)
8.463
GRAVY (calculated)
0.075
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYFGHLIIS LVGLGVYSFS CCLTGRLVQM ELIVIAMILL LLVGALFVIP RSNRKGKARG THPSVTTKTI RTYTKEEVSL HNTRTDCWII VKDKVYNVTP
101: YVEEHPGGDA ILNNAGGDST KGFYGPQHAT RVFDMVDEFY IGDLKN
101: YVEEHPGGDA ILNNAGGDST KGFYGPQHAT RVFDMVDEFY IGDLKN
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.