Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031489.1-P | Field mustard | extracellular, golgi, vacuole | 98.35 | 98.35 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 98.35 | 97.54 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 63.64 | 91.67 |
| CDY44610 | Canola | endoplasmic reticulum | 61.98 | 89.29 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 85.12 | 85.12 |
| CDY46984 | Canola | endoplasmic reticulum | 85.12 | 78.03 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 52.89 | 76.19 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 52.07 | 64.29 |
| Os09t0334600-00 | Rice | mitochondrion | 46.28 | 63.64 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 61.98 | 63.03 |
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 57.85 | 59.32 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 57.85 | 59.32 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 57.85 | 59.32 |
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 56.2 | 57.63 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 56.2 | 57.63 |
| OQU80382 | Sorghum | extracellular, vacuole | 54.55 | 55.93 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 52.89 | 54.24 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 52.07 | 52.94 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 61.16 | 48.37 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 54.55 | 45.21 |
| CDX85016 | Canola | cytosol | 32.23 | 28.89 |
| CDY16153 | Canola | cytosol | 32.23 | 28.89 |
| CDY47078 | Canola | nucleus | 24.79 | 25.42 |
| CDY19161 | Canola | cytosol | 28.1 | 25.37 |
| CDX79471 | Canola | cytosol | 28.1 | 25.37 |
| CDY23792 | Canola | cytosol | 28.1 | 25.37 |
| CDX96233 | Canola | cytosol | 27.27 | 24.63 |
| CDX84725 | Canola | cytosol | 27.27 | 24.63 |
| CDY28830 | Canola | cytosol | 27.27 | 24.63 |
| CDY59638 | Canola | cytosol | 27.27 | 24.63 |
| CDY47080 | Canola | cytosol | 26.45 | 23.88 |
| CDY27310 | Canola | cytosol | 24.79 | 22.39 |
| CDY61721 | Canola | cytosol | 24.79 | 22.39 |
| CDY14370 | Canola | cytosol | 28.1 | 21.79 |
| CDY19937 | Canola | cytosol | 24.79 | 21.43 |
| CDY00045 | Canola | cytosol | 24.79 | 21.43 |
| CDY12180 | Canola | cytosol | 27.27 | 21.15 |
| CDX86279 | Canola | cytosol | 23.97 | 21.01 |
| CDX85364 | Canola | cytosol | 23.97 | 21.01 |
| CDY41545 | Canola | cytosol | 22.31 | 20.15 |
| CDX80035 | Canola | cytosol | 21.49 | 19.4 |
| CDY20247 | Canola | mitochondrion | 28.93 | 18.42 |
Protein Annotations
| Gene3D:3.10.120.10 | MapMan:35.1 | GO:A0A078GDH4 | UniProt:A0A078GDH4 | EnsemblPlants:CDY24550 | ProteinID:CDY24550 |
| ProteinID:CDY24550.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0020037 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00026867001 | InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 |
| PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF65 | SMART:SM01117 |
| SUPFAM:SSF55856 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE2376 | SEG:seg | : |
Description
BnaA01g22540DBnaA01g22540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDH4]
Coordinates
chrLK032160:-:558384..558989
Molecular Weight (calculated)
13578.9 Da
IEP (calculated)
4.947
GRAVY (calculated)
-0.579
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAVIGLLLG FLVSALFLIQ GKRRSSNGGQ EKKQSSNDEP KDSKPKSYSK SEVAEHNRRD DCWIIIKDKV YDVTSYVEEH PGGDAILDHA GDDSTDGFFG
101: PQHATRVFDM IEDFYIGQLR E
101: PQHATRVFDM IEDFYIGQLR E
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.