Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84725 | Canola | cytosol | 97.01 | 97.01 |
| CDY23792 | Canola | cytosol | 96.27 | 96.27 |
| CDY19161 | Canola | cytosol | 96.27 | 96.27 |
| AT2G32720.1 | Thale cress | cytosol | 94.03 | 94.03 |
| CDY59638 | Canola | cytosol | 94.03 | 94.03 |
| CDY12180 | Canola | cytosol | 94.78 | 81.41 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 77.61 | 77.04 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 76.87 | 76.87 |
| TraesCS3D01G529500.1 | Wheat | cytosol, golgi, unclear | 77.61 | 75.91 |
| EES02143 | Sorghum | cytosol | 76.12 | 75.56 |
| TraesCS3A01G524000.2 | Wheat | cytosol, golgi, plastid | 76.87 | 75.18 |
| TraesCS5D01G152500.1 | Wheat | golgi | 74.63 | 74.63 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 74.63 | 74.63 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 74.63 | 74.63 |
| Os05t0108800-01 | Rice | plasma membrane | 76.12 | 74.45 |
| EES17559 | Sorghum | cytosol | 73.88 | 74.44 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 73.88 | 73.88 |
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 73.88 | 73.88 |
| CDX86279 | Canola | cytosol | 67.91 | 65.94 |
| CDX96233 | Canola | cytosol | 65.67 | 65.67 |
| CDY28830 | Canola | cytosol | 65.67 | 65.67 |
| CDX85364 | Canola | cytosol | 67.16 | 65.22 |
| CDY19937 | Canola | cytosol | 66.42 | 63.57 |
| CDY00045 | Canola | cytosol | 66.42 | 63.57 |
| CDY47080 | Canola | cytosol | 59.7 | 59.7 |
| HORVU3Hr1G114360.3 | Barley | plasma membrane | 76.87 | 59.54 |
| CDY14370 | Canola | cytosol | 66.42 | 57.05 |
| CDY20247 | Canola | mitochondrion | 65.67 | 46.32 |
| CDY61721 | Canola | cytosol | 45.52 | 45.52 |
| CDY27310 | Canola | cytosol | 45.52 | 45.52 |
| Solyc12g098320.1.1 | Tomato | cytosol | 23.88 | 45.07 |
| CDY47078 | Canola | nucleus | 38.81 | 44.07 |
| CDX80035 | Canola | cytosol | 43.28 | 43.28 |
| CDY41545 | Canola | cytosol | 42.54 | 42.54 |
| PGSC0003DMT400019916 | Potato | cytosol | 44.78 | 42.25 |
| CDY16153 | Canola | cytosol | 41.79 | 41.48 |
| CDX85016 | Canola | cytosol | 41.79 | 41.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 68.66 | 37.55 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 25.37 | 28.1 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 25.37 | 27.87 |
| CDY46984 | Canola | endoplasmic reticulum | 26.87 | 27.27 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 15.67 | 25.0 |
| CDY44610 | Canola | endoplasmic reticulum | 15.67 | 25.0 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | GO:A0A078CQL4 | EnsemblPlants:CDX79471 | ProteinID:CDX79471 | ProteinID:CDX79471.1 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| EnsemblPlantsGene:GSBRNA2T00132212001 | InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 |
| PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF69 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix |
| UniParc:UPI0004EB5D4C | SEG:seg | : | : | : | : |
Description
BnaC03g18070D
Coordinates
chrLK031818:-:246236..247272
Molecular Weight (calculated)
15153.0 Da
IEP (calculated)
5.214
GRAVY (calculated)
-0.408
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEAKIFTL SEVSEHNHAH DCWIVINGKV YNVTKFLEDH PGGDEVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKTK YTPPKQPHYN
101: QDKTSEFIIK ILQFLVPLAI LGLAVGIRIY TKAA
101: QDKTSEFIIK ILQFLVPLAI LGLAVGIRIY TKAA
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.