Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • vacuole 1
  • endoplasmic reticulum 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041963_P001 Maize plasma membrane 97.78 97.78
Zm00001d011786_P001 Maize plasma membrane 96.3 96.3
Os01t0971500-01 Rice cytosol, plasma membrane 92.59 92.59
TraesCS3A01G524000.2 Wheat cytosol, golgi, plastid 93.33 91.97
TraesCS3D01G529500.1 Wheat cytosol, golgi, unclear 92.59 91.24
EES17559 Sorghum cytosol 88.15 89.47
TraesCS5D01G152500.1 Wheat golgi 84.44 85.07
TraesCS5A01G138900.1 Wheat cytosol, golgi 84.44 85.07
TraesCS5B01G138200.1 Wheat cytosol, golgi 83.7 84.33
HORVU5Hr1G045040.1 Barley cytosol, plasma membrane 82.22 82.84
GSMUA_Achr3P19410_001 Banana cytosol 82.22 82.84
GSMUA_Achr6P06700_001 Banana cytosol 78.52 79.1
Bra022898.1-P Field mustard cytosol 76.3 76.87
AT2G32720.1 Thale cress cytosol 76.3 76.87
VIT_07s0005g06290.t01 Wine grape cytosol 75.56 76.69
PGSC0003DMT400051945 Potato cytosol 74.81 76.52
CDY23792 Canola cytosol 75.56 76.12
CDX79471 Canola cytosol 75.56 76.12
PGSC0003DMT400045531 Potato cytosol 74.81 75.94
PGSC0003DMT400003091 Potato cytosol 75.56 75.56
KRG99574 Soybean cytosol, endoplasmic reticulum 75.56 75.56
CDY19161 Canola cytosol 74.81 75.37
Bra021809.1-P Field mustard cytosol 74.81 75.37
Bra005564.1-P Field mustard cytosol 74.07 74.63
CDY59638 Canola cytosol 74.07 74.63
CDX84725 Canola cytosol 74.07 74.63
KRH66053 Soybean endoplasmic reticulum 74.07 74.07
HORVU3Hr1G114360.3 Barley plasma membrane 92.59 72.25
CDX85364 Canola cytosol 67.41 65.94
KRG99780 Soybean cytosol 67.41 65.94
Bra036160.1-P Field mustard cytosol 68.15 65.71
CDY19937 Canola cytosol 68.15 65.71
CDX86279 Canola cytosol 66.67 65.22
Bra037461.1-P Field mustard cytosol 65.93 64.49
CDY12180 Canola cytosol 74.07 64.1
KRH46744 Soybean endoplasmic reticulum 67.41 64.08
CDY00045 Canola cytosol 65.93 63.57
AT5G48810.1 Thale cress cytosol 65.19 62.86
EER91363 Sorghum cytosol 59.26 59.7
Solyc06g053180.2.1 Tomato plastid 32.59 51.76
EES15848 Sorghum cytosol 44.44 40.82
EER93435 Sorghum cytosol 40.0 40.6
GSMUA_AchrUn_... Banana mitochondrion 71.85 39.59
PGSC0003DMT400019916 Potato cytosol 41.48 39.44
OQU85747 Sorghum mitochondrion 45.93 28.97
OQU80382 Sorghum extracellular, vacuole 21.48 24.58
EER98759 Sorghum endoplasmic reticulum, extracellular 21.48 24.58
Protein Annotations
MapMan:21.9.1.7.1.3Gene3D:3.10.120.10EntrezGene:8078054UniProt:C5XJD6InterPro:Cyt_B5-like_heme/steroid-bdInterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BSEnsemblPlants:EES02143ProteinID:EES02143ProteinID:EES02143.1GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0020037GO:GO:0046872InterPro:IPR001199
InterPro:IPR036400PFAM:PF00173PRINTS:PR00363ScanProsite:PS00191PFscan:PS50255PANTHER:PTHR19359
PANTHER:PTHR19359:SF66SMART:SM01117EnsemblPlantsGene:SORBI_3003G443300SUPFAM:SSF55856unigene:Sbi.684TMHMM:TMhelix
UniParc:UPI0001A84D0DRefSeq:XP_002457023.1::::
Description
hypothetical protein
Coordinates
chr3:+:74135247..74137846
Molecular Weight (calculated)
14933.7 Da
IEP (calculated)
4.761
GRAVY (calculated)
-0.242
Length
135 amino acids
Sequence
(BLAST)
001: MSESKVYTLE EVAKHNTKDD CWLVIGGKVY NVTKFLDDHP GGDDVLLSST AKDATDDFED VGHSTTARAM MDEYLVGEID AATIPTKVKY TPPKQPHYNQ
101: DKTPEFVIKI LQFLVPLAIL GLAVAVRIYT KSESA
Best Arabidopsis Sequence Match ( AT2G32720.1 )
(BLAST)
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.