Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- endoplasmic reticulum 1
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_00s1665g00010.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48810.1 | VIT_00s1665g00010.t01 | AT5G47120.1 | 19054355 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003091 | Potato | cytosol | 82.71 | 81.48 |
| PGSC0003DMT400045531 | Potato | cytosol | 81.2 | 81.2 |
| PGSC0003DMT400051945 | Potato | cytosol | 80.45 | 81.06 |
| Solyc06g083440.2.1 | Tomato | cytosol | 80.45 | 80.45 |
| Solyc09g061230.2.1 | Tomato | cytosol | 80.45 | 80.45 |
| Solyc06g007930.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid, unclear | 81.2 | 80.0 |
| KRG99574 | Soybean | cytosol, endoplasmic reticulum | 81.2 | 80.0 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 79.7 | 79.1 |
| KRH66053 | Soybean | endoplasmic reticulum | 79.7 | 78.52 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 78.95 | 78.36 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 77.44 | 76.3 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 76.69 | 76.12 |
| EES17559 | Sorghum | cytosol | 75.94 | 75.94 |
| EES02143 | Sorghum | cytosol | 76.69 | 75.56 |
| TraesCS5D01G152500.1 | Wheat | golgi | 75.94 | 75.37 |
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 75.94 | 75.37 |
| Os05t0108800-01 | Rice | plasma membrane | 75.94 | 73.72 |
| KRG99780 | Soybean | cytosol | 75.94 | 73.19 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 73.68 | 73.13 |
| TraesCS3D01G529500.1 | Wheat | cytosol, golgi, unclear | 72.93 | 70.8 |
| TraesCS3A01G524000.2 | Wheat | cytosol, golgi, plastid | 72.93 | 70.8 |
| KRH46744 | Soybean | endoplasmic reticulum | 74.44 | 69.72 |
| Bra036160.1-P | Field mustard | cytosol | 69.92 | 66.43 |
| CDY19937 | Canola | cytosol | 69.92 | 66.43 |
| AT5G48810.1 | Thale cress | cytosol | 69.92 | 66.43 |
| CDX85364 | Canola | cytosol | 68.42 | 65.94 |
| CDY00045 | Canola | cytosol | 69.17 | 65.71 |
| CDX86279 | Canola | cytosol | 67.67 | 65.22 |
| Bra037461.1-P | Field mustard | cytosol | 66.92 | 64.49 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 60.9 | 60.45 |
| HORVU3Hr1G114360.3 | Barley | plasma membrane | 72.18 | 55.49 |
| VIT_01s0011g00210.t01 | Wine grape | cytosol | 41.35 | 41.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 72.93 | 39.59 |
| VIT_18s0001g09400.t01 | Wine grape | mitochondrion | 42.11 | 38.1 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 27.82 | 37.76 |
| Zm00001d035685_P001 | Maize | mitochondrion | 36.84 | 31.61 |
Protein Annotations
| EntrezGene:100248225 | wikigene:100248225 | MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | UniProt:A5ATD8 | EMBL:AM434823 |
| ProteinID:CAN78289 | ProteinID:CAN78289.1 | ProteinID:CBI37308 | ProteinID:CBI37308.3 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf |
| InterPro:Cyt_B5_heme-BS | EMBL:FN596502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | EntrezGene:LOC100248225 |
| wikigene:LOC100248225 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF69 | SMART:SM01117 | SUPFAM:SSF55856 | TIGR:TC54860 | TMHMM:TMhelix | UniParc:UPI000151F7F1 |
| ArrayExpress:VIT_07s0005g06290 | EnsemblPlantsGene:VIT_07s0005g06290 | EnsemblPlants:VIT_07s0005g06290.t01 | RefSeq:XP_002265677 | RefSeq:XP_002265677.1 | : |
Description
No Description!
Coordinates
chr7:+:11372122..11377368
Molecular Weight (calculated)
14675.3 Da
IEP (calculated)
4.605
GRAVY (calculated)
-0.231
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGKVYTLA EVSEHNTPKD CWLIIDGKVY DVTKFLEDHP GGDDVLLSAT GKDATDDFED VGHSSSARAM MDEFHVGDID TATIPSKVNY TPPKQPHYNQ
101: DKTSEFVIKL LQFLVPLIIL GVAVGIRFYT KSA
101: DKTSEFVIKL LQFLVPLIIL GVAVGIRFYT KSA
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.