Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 1
- endoplasmic reticulum 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | cytosol, nucleus |
| GSMUA_Achr11P... | cytosol, nucleus |
| GSMUA_Achr2P10740_001 | cytosol, nucleus |
| GSMUA_Achr2P10760_001 | cytosol, nucleus |
| GSMUA_Achr6P36970_001 | cytosol |
| GSMUA_Achr7P07470_001 | cytosol |
| GSMUA_Achr8P14090_001 | cytosol, nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P19410_001 | Banana | cytosol | 85.07 | 85.07 |
| Zm00001d041963_P001 | Maize | plasma membrane | 79.85 | 79.26 |
| VIT_07s0005g06290.t01 | Wine grape | cytosol | 78.36 | 78.95 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 79.1 | 78.52 |
| EES02143 | Sorghum | cytosol | 79.1 | 78.52 |
| Zm00001d011786_P001 | Maize | plasma membrane | 79.1 | 78.52 |
| EES17559 | Sorghum | cytosol | 76.12 | 76.69 |
| TraesCS3A01G524000.2 | Wheat | cytosol, golgi, plastid | 78.36 | 76.64 |
| AT2G32720.1 | Thale cress | cytosol | 76.12 | 76.12 |
| PGSC0003DMT400045531 | Potato | cytosol | 75.37 | 75.94 |
| TraesCS3D01G529500.1 | Wheat | cytosol, golgi, unclear | 77.61 | 75.91 |
| KRG99574 | Soybean | cytosol, endoplasmic reticulum | 76.12 | 75.56 |
| Zm00001d011081_P001 | Maize | plasma membrane, plastid | 74.63 | 75.19 |
| PGSC0003DMT400051945 | Potato | cytosol | 73.88 | 75.0 |
| CDX79471 | Canola | cytosol | 74.63 | 74.63 |
| CDY59638 | Canola | cytosol | 74.63 | 74.63 |
| KRH66053 | Soybean | endoplasmic reticulum | 74.63 | 74.07 |
| CDX84725 | Canola | cytosol | 73.88 | 73.88 |
| Bra005564.1-P | Field mustard | cytosol | 73.88 | 73.88 |
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 73.88 | 73.88 |
| Bra022898.1-P | Field mustard | cytosol | 73.88 | 73.88 |
| PGSC0003DMT400003091 | Potato | cytosol | 73.88 | 73.33 |
| TraesCS5D01G152500.1 | Wheat | golgi | 73.13 | 73.13 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 73.13 | 73.13 |
| Bra021809.1-P | Field mustard | cytosol | 73.13 | 73.13 |
| CDY23792 | Canola | cytosol | 73.13 | 73.13 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 73.13 | 73.13 |
| CDY19161 | Canola | cytosol | 73.13 | 73.13 |
| Os05t0108800-01 | Rice | plasma membrane | 74.63 | 72.99 |
| Bra036160.1-P | Field mustard | cytosol | 68.66 | 65.71 |
| CDY19937 | Canola | cytosol | 68.66 | 65.71 |
| KRG99780 | Soybean | cytosol | 67.16 | 65.22 |
| CDY12180 | Canola | cytosol | 74.63 | 64.1 |
| CDY00045 | Canola | cytosol | 66.42 | 63.57 |
| KRH46744 | Soybean | endoplasmic reticulum | 67.16 | 63.38 |
| CDX86279 | Canola | cytosol | 64.18 | 62.32 |
| AT5G48810.1 | Thale cress | cytosol | 64.93 | 62.14 |
| CDX85364 | Canola | cytosol | 63.43 | 61.59 |
| Bra037461.1-P | Field mustard | cytosol | 63.43 | 61.59 |
| HORVU3Hr1G114360.3 | Barley | plasma membrane | 76.87 | 59.54 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 57.46 | 57.89 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 63.43 | 52.15 |
| GSMUA_Achr11P... | Banana | cytosol | 48.51 | 49.24 |
| Solyc06g053180.2.1 | Tomato | plastid | 29.85 | 47.06 |
| GSMUA_Achr2P13570_001 | Banana | cytosol | 43.28 | 43.61 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 76.12 | 41.63 |
| PGSC0003DMT400019916 | Potato | cytosol | 43.28 | 40.85 |
| GSMUA_Achr3P16820_001 | Banana | cytosol | 41.79 | 40.58 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 45.52 | 39.35 |
| GSMUA_Achr6P28600_001 | Banana | cytosol, golgi, peroxisome | 39.55 | 39.26 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 39.55 | 35.57 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 26.12 | 23.97 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr6G06700_001 | EnsemblPlants:GSMUA_Achr6P06700_001 | EnsemblPlants:GSMUA_Achr6T06700_001 | InterPro:IPR001199 | InterPro:IPR036400 | UniProt:M0T4R9 |
| PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF66 |
| SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0002958A37 | : | : |
Description
Probable cytochrome b5 isoform 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06700_001]
Coordinates
chr6:+:4541571..4545127
Molecular Weight (calculated)
14826.6 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.266
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHGKVYTL AEVSTHNTHK DCWLVINGKV YDVTKFLEDH PGGDDVLLSS TGKDATDDFE DIGHSNTARA MMDEYFIGKI DAATIPQKVK YTPPKQPHYN
101: QDKTSEFIVR LLQFLVPVAI LGSAVAVRIY TKAA
101: QDKTSEFIVR LLQFLVPVAI LGSAVAVRIY TKAA
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.