Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plastid: 22065420 plastid: 23198870 plasma membrane: 23353019 mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
23353019
doi
University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
23198870
doi
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17559 | Sorghum | cytosol | 96.99 | 96.99 |
| Zm00001d041963_P001 | Maize | plasma membrane | 88.72 | 87.41 |
| Zm00001d011786_P001 | Maize | plasma membrane | 87.97 | 86.67 |
| Os05t0108800-01 | Rice | plasma membrane | 88.72 | 86.13 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 77.44 | 76.87 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 75.19 | 74.63 |
| Solyc06g053180.2.1 | Tomato | plastid | 33.08 | 51.76 |
| Zm00001d032442_P002 | Maize | cytosol | 53.38 | 51.08 |
| Zm00001d013839_P001 | Maize | plasma membrane | 61.65 | 45.05 |
| Zm00001d017425_P001 | Maize | cytosol | 44.36 | 42.45 |
| Zm00001d023978_P001 | Maize | cytosol | 39.1 | 39.69 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 72.18 | 39.18 |
| Zm00001d034048_P003 | Maize | cytosol | 38.35 | 36.43 |
| Zm00001d035685_P001 | Maize | mitochondrion | 42.11 | 36.13 |
| Zm00001d013257_P002 | Maize | plastid | 38.35 | 34.0 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 21.8 | 24.58 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | ProteinID:AQK95616.1 | UniProt:B6T7Z2 | EMBL:BT062713 | InterPro:Cyt_B5-like_heme/steroid-bd |
| InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | EMBL:EU961107 | EMBL:EU963310 | EMBL:EU972968 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 |
| PANTHER:PTHR19359 | PANTHER:PTHR19359:SF66 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000182CDD6 |
| EnsemblPlantsGene:Zm00001d011081 | EnsemblPlants:Zm00001d011081_P001 | EnsemblPlants:Zm00001d011081_T001 | : | : | : |
Description
Cytochrome B5 isoform D
Coordinates
chr8:-:138418132..138420302
Molecular Weight (calculated)
14675.5 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.165
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKVFTLDAV AKHNSKEDCW LIIGGKVYDV TKFLVDHPGG DDVLLSSTGK DATDDFEDVG HSNTARAMMD EYLVGEIDAS TIPSRTKYVP PKQPHYNQDK
101: TPEFVIKILQ FLVPLAILGL AVAVRMYTKS ESA
101: TPEFVIKILQ FLVPLAILGL AVAVRMYTKS ESA
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.