Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91363 | Sorghum | cytosol | 80.58 | 83.58 |
| TraesCS1D01G184800.1 | Wheat | cytosol | 68.35 | 70.9 |
| TraesCS1A01G181500.1 | Wheat | cytosol, golgi | 67.63 | 70.15 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 50.36 | 67.31 |
| Zm00001d013839_P001 | Maize | plasma membrane | 79.14 | 60.44 |
| PGSC0003DMT400013956 | Potato | cytosol | 57.55 | 59.7 |
| Bra022660.1-P | Field mustard | cytosol | 56.83 | 58.96 |
| CDX96233 | Canola | cytosol | 56.83 | 58.96 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 56.83 | 58.96 |
| CDY28830 | Canola | cytosol | 56.83 | 58.96 |
| KRH64355 | Soybean | endoplasmic reticulum | 58.27 | 57.86 |
| AT5G53560.1 | Thale cress | cytosol | 55.4 | 57.46 |
| PGSC0003DMT400047688 | Potato | cytosol | 54.68 | 56.72 |
| Zm00001d011081_P001 | Maize | plasma membrane, plastid | 51.08 | 53.38 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 50.36 | 52.63 |
| CDY14370 | Canola | cytosol | 58.99 | 52.56 |
| Zm00001d041963_P001 | Maize | plasma membrane | 49.64 | 51.11 |
| Zm00001d011786_P001 | Maize | plasma membrane | 49.64 | 51.11 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 55.4 | 47.24 |
| HORVU1Hr1G047990.4 | Barley | plastid | 67.63 | 46.77 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 66.19 | 43.4 |
| GSMUA_Achr11P... | Banana | cytosol | 41.01 | 43.18 |
| CDY20247 | Canola | mitochondrion | 58.99 | 43.16 |
| KRH53581 | Soybean | endoplasmic reticulum | 59.71 | 42.56 |
| Zm00001d017425_P001 | Maize | cytosol | 41.73 | 41.73 |
| Solyc03g082600.2.1 | Tomato | plastid | 56.12 | 41.05 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 44.6 | 40.0 |
| Zm00001d023978_P001 | Maize | cytosol | 27.34 | 29.01 |
| Zm00001d034048_P003 | Maize | cytosol | 28.78 | 28.57 |
| Zm00001d013257_P002 | Maize | plastid | 25.9 | 24.0 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 20.14 | 23.73 |
| Zm00001d035685_P001 | Maize | mitochondrion | 22.3 | 20.0 |
Protein Annotations
| EnsemblPlants:Zm00001d032442_P002 | EnsemblPlants:Zm00001d032442_T002 | EnsemblPlantsGene:Zm00001d032442 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf |
| InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF22 | PFAM:PF00173 | PFscan:PS50255 |
| ProteinID:ONM05082.1 | ProteinID:ONM05084.1 | SMART:SM01117 | SUPFAM:SSF55856 | UniParc:UPI000843C8D9 | UniProt:A0A1D6KQP9 |
| MapMan:21.9.1.7.1.3 | : | : | : | : | : |
Description
Cytochrome b5 isoform E
Coordinates
chr1:+:226568614..226576768
Molecular Weight (calculated)
15811.1 Da
IEP (calculated)
7.074
GRAVY (calculated)
-0.329
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MASENKVFGF EEVAKHNVTK DCWIIIAGKV LRSKESLRRY LFDDKVLDKV LWRIIDGKDA TADFEDIGHS DSARDMMEKY HIGQIDASTI PAKRAHVQPQ
101: QAPSHADKDN DLPIKILQFL VPIMILGLAF GIRQYTKSE
101: QAPSHADKDN DLPIKILQFL VPIMILGLAF GIRQYTKSE
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Arabidopsis Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.