Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G181500.1 | Wheat | cytosol, golgi | 62.26 | 98.51 |
| TraesCS1D01G184800.1 | Wheat | cytosol | 61.79 | 97.76 |
| EER91363 | Sorghum | cytosol | 52.83 | 83.58 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 39.62 | 80.77 |
| HORVU1Hr1G047990.4 | Barley | plastid | 75.94 | 80.1 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 44.81 | 70.9 |
| Bra022660.1-P | Field mustard | cytosol | 43.4 | 68.66 |
| CDX96233 | Canola | cytosol | 43.4 | 68.66 |
| CDY28830 | Canola | cytosol | 43.4 | 68.66 |
| AT5G53560.1 | Thale cress | cytosol | 42.92 | 67.91 |
| PGSC0003DMT400047688 | Potato | cytosol | 42.92 | 67.91 |
| PGSC0003DMT400013956 | Potato | cytosol | 42.92 | 67.91 |
| KRH64355 | Soybean | endoplasmic reticulum | 44.34 | 67.14 |
| Zm00001d032442_P002 | Maize | cytosol | 43.4 | 66.19 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 38.68 | 61.65 |
| CDY14370 | Canola | cytosol | 44.81 | 60.9 |
| Zm00001d013839_P001 | Maize | plasma membrane | 51.42 | 59.89 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 43.87 | 57.06 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 35.38 | 55.97 |
| TraesCS6B01G284000.1 | Wheat | cytosol | 34.91 | 52.11 |
| GSMUA_Achr11P... | Banana | cytosol | 32.08 | 51.52 |
| CDY20247 | Canola | mitochondrion | 44.81 | 50.0 |
| KRH53581 | Soybean | endoplasmic reticulum | 45.28 | 49.23 |
| Solyc03g082600.2.1 | Tomato | plastid | 43.87 | 48.95 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 34.43 | 47.1 |
| TraesCS5B01G396800.1 | Wheat | cytosol | 23.58 | 37.04 |
| TraesCS7B01G336600.1 | Wheat | cytosol | 25.47 | 36.24 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 14.62 | 26.27 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G199300.1 | EnsemblPlantsGene:TraesCS1B01G199300 | Gene3D:3.10.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | InterPro:IPR001199 | InterPro:IPR036400 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF22 | PFAM:PF00173 | PFscan:PS50255 | PRINTS:PR00363 | ScanProsite:PS00191 | SMART:SM01117 |
| SUPFAM:SSF55856 | MapMan:21.9.1.7.1.3 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:357425612..357427422
Molecular Weight (calculated)
23028.7 Da
IEP (calculated)
7.723
GRAVY (calculated)
-0.190
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MREGPDAPGS NTADSGATAH ARTHAERGPC PKRVIHFLLA SFSLGLGACV TPSARPPHRR LVASRPLPAP AWARVLRAMA GEKRMFGFEE VAKHNVAKDC
101: WLVIAGKVYD VTPFMDEHPG GDEVLLAVTG KDATSDFEDI GHSDSAREMM EKYHIGEIDA STIPAKRTFV PPQQGSHVQA KDSDLLIKIL QFLVPILILG
201: LAFGVRHYSK SE
101: WLVIAGKVYD VTPFMDEHPG GDEVLLAVTG KDATSDFEDI GHSDSAREMM EKYHIGEIDA STIPAKRTFV PPQQGSHVQA KDSDLLIKIL QFLVPILILG
201: LAFGVRHYSK SE
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Arabidopsis Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.