Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28830 | Canola | cytosol | 92.54 | 92.54 |
| CDX96233 | Canola | cytosol | 92.54 | 92.54 |
| Bra022660.1-P | Field mustard | cytosol | 92.54 | 92.54 |
| PGSC0003DMT400047688 | Potato | cytosol | 82.09 | 82.09 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 79.85 | 79.85 |
| CDY14370 | Canola | cytosol | 91.79 | 78.85 |
| KRH64355 | Soybean | endoplasmic reticulum | 82.09 | 78.57 |
| PGSC0003DMT400013956 | Potato | cytosol | 78.36 | 78.36 |
| EER91363 | Sorghum | cytosol | 69.4 | 69.4 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 53.73 | 69.23 |
| TraesCS1D01G184800.1 | Wheat | cytosol | 68.66 | 68.66 |
| TraesCS1A01G181500.1 | Wheat | cytosol, golgi | 67.91 | 67.91 |
| CDY20247 | Canola | mitochondrion | 91.04 | 64.21 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 63.43 | 63.91 |
| AT2G32720.1 | Thale cress | cytosol | 61.94 | 61.94 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 73.13 | 60.12 |
| Solyc03g082600.2.1 | Tomato | plastid | 82.09 | 57.89 |
| AT5G48810.1 | Thale cress | cytosol | 59.7 | 57.14 |
| KRH53581 | Soybean | endoplasmic reticulum | 82.09 | 56.41 |
| GSMUA_Achr11P... | Banana | cytosol | 55.22 | 56.06 |
| Zm00001d032442_P002 | Maize | cytosol | 57.46 | 55.4 |
| Zm00001d013839_P001 | Maize | plasma membrane | 70.15 | 51.65 |
| AT2G46650.1 | Thale cress | cytosol | 47.76 | 48.48 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 54.48 | 47.1 |
| HORVU1Hr1G047990.4 | Barley | plastid | 67.91 | 45.27 |
| AT1G26340.1 | Thale cress | cytosol | 45.52 | 45.19 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 67.91 | 42.92 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 25.37 | 28.1 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | EntrezGene:835438 | UniProt:A0A178USU5 | EMBL:AB007801 | ProteinID:AED96377.1 |
| ArrayExpress:AT5G53560 | EnsemblPlantsGene:AT5G53560 | RefSeq:AT5G53560 | TAIR:AT5G53560 | RefSeq:AT5G53560-TAIR-G | EnsemblPlants:AT5G53560.1 |
| TAIR:AT5G53560.1 | Symbol:ATB5-A | EMBL:AY080878 | EMBL:AY087070 | EMBL:AY114045 | Unigene:At.20842 |
| ProteinID:BAB09732.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | EMBL:F20001 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR001199 | InterPro:IPR036400 | RefSeq:NP_200168.1 |
| ProteinID:OAO95781.1 | PFAM:PF00173 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF22 | UniProt:Q42342 |
| SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0000001425 | : | : |
Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
Coordinates
chr5:+:21759329..21760578
Molecular Weight (calculated)
15084.9 Da
IEP (calculated)
4.928
GRAVY (calculated)
-0.342
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.