Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024721.1-P | Field mustard | cytosol | 86.67 | 86.67 |
| CDY16153 | Canola | cytosol | 86.67 | 86.67 |
| CDX85016 | Canola | cytosol | 85.93 | 85.93 |
| PGSC0003DMT400072748 | Potato | cytosol | 69.63 | 70.68 |
| VIT_01s0011g00210.t01 | Wine grape | cytosol | 69.63 | 70.15 |
| Solyc05g012080.2.1 | Tomato | cytosol, plastid | 68.89 | 69.92 |
| KRH53553 | Soybean | cytosol | 56.3 | 62.81 |
| GSMUA_Achr2P13570_001 | Banana | cytosol | 60.0 | 60.9 |
| EER93435 | Sorghum | cytosol | 59.26 | 60.15 |
| TraesCS5B01G396800.1 | Wheat | cytosol | 60.0 | 60.0 |
| TraesCS5D01G401800.1 | Wheat | cytosol | 58.52 | 58.52 |
| TraesCS5A01G391900.1 | Wheat | cytosol | 58.52 | 58.52 |
| Zm00001d034048_P003 | Maize | cytosol | 56.3 | 54.29 |
| Zm00001d013257_P002 | Maize | plastid | 57.78 | 52.0 |
| AT5G53560.1 | Thale cress | cytosol | 45.19 | 45.52 |
| AT2G46650.1 | Thale cress | cytosol | 43.7 | 44.7 |
| HORVU5Hr1G095930.3 | Barley | endoplasmic reticulum | 48.89 | 43.71 |
| AT2G32720.1 | Thale cress | cytosol | 40.74 | 41.04 |
| AT5G48810.1 | Thale cress | cytosol | 37.04 | 35.71 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 26.67 | 29.75 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | EntrezGene:839176 | UniProt:A0A178WMK3 | ProteinID:AAF98581.1 | ProteinID:AAG50683.1 |
| ProteinID:AEE30679.1 | EMBL:AF332415 | EMBL:AK117459 | ArrayExpress:AT1G26340 | EnsemblPlantsGene:AT1G26340 | RefSeq:AT1G26340 |
| TAIR:AT1G26340 | RefSeq:AT1G26340-TAIR-G | EnsemblPlants:AT1G26340.1 | TAIR:AT1G26340.1 | EMBL:AY084761 | Unigene:At.15975 |
| Symbol:B5 #6 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0010319 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0020037 | GO:GO:0031966 | GO:GO:0031969 | GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 |
| RefSeq:NP_173958.1 | ProteinID:OAP19500.1 | PFAM:PF00173 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF25 | UniProt:Q9FDW8 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000005EC31 |
| SEG:seg | : | : | : | : | : |
Description
CB5-ACB5-A [Source:UniProtKB/TrEMBL;Acc:A0A178WMK3]
Coordinates
chr1:+:9113864..9114977
Molecular Weight (calculated)
15220.9 Da
IEP (calculated)
4.268
GRAVY (calculated)
-0.364
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTLTKLYSM EEAATHNKQD DCWVVIDGKV YDVSSYMDEH PGGDDVLLAV AGKDATDDFE DAGHSKDARE LMEKYFIGEL DESSLPEIPE LKIYKKDQPQ
101: DSVQKLFDLT KQYWVVPVSI ITISVAVSVL FSRKT
101: DSVQKLFDLT KQYWVVPVSI ITISVAVSVL FSRKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.