Factsheet for HORVU5Hr1G095930.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1
endoplasmic reticulum 4
plasma membrane 3
extracellular 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G014450.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26340.1	HORVU6Hr1G014450.1	AT5G47120.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G401800.1	Wheat	cytosol	72.19	80.74
TraesCS5A01G391900.1	Wheat	cytosol	71.52	80.0
TraesCS5B01G396800.1	Wheat	cytosol	69.54	77.78
EER93435	Sorghum	cytosol	58.28	66.17
Zm00001d034048_P003	Maize	cytosol	58.94	63.57
Zm00001d013257_P002	Maize	plastid	56.95	57.33
KRH53553	Soybean	cytosol	43.71	54.55
PGSC0003DMT400072748	Potato	cytosol	47.02	53.38
Solyc05g012080.2.1	Tomato	cytosol, plastid	46.36	52.63
Bra024721.1-P	Field mustard	cytosol	45.7	51.11
CDY16153	Canola	cytosol	45.7	51.11
CDX85016	Canola	cytosol	45.03	50.37
VIT_01s0011g00210.t01	Wine grape	cytosol	44.37	50.0
GSMUA_Achr2P13570_001	Banana	cytosol	43.71	49.62
AT1G26340.1	Thale cress	cytosol	43.71	48.89
HORVU5Hr1G045040.1	Barley	cytosol, plasma membrane	27.81	31.34
HORVU6Hr1G061420.4	Barley	cytosol	28.48	26.38
HORVU3Hr1G114360.3	Barley	plasma membrane	29.14	25.43
HORVU1Hr1G047990.4	Barley	plastid	29.14	21.89
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	15.89	20.34
HORVU7Hr1G100040.1	Barley	plastid	24.5	18.32

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009536
GO:GO:0009707	GO:GO:0010319	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	GO:GO:0046872
EnsemblPlantsGene:HORVU5Hr1G095930	EnsemblPlants:HORVU5Hr1G095930.3	InterPro:IPR001199	InterPro:IPR036400	UniProt:M0WXY1	PFAM:PF00173
PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF25	SMART:SM01117
SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI000296487C	SEG:seg	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0WXY1]

Coordinates

chrchr5H:-:600016798..600017345

Molecular Weight (calculated)

16785.2 Da

IEP (calculated)

4.230

GRAVY (calculated)

0.096

Length

151 amino acids

Sequence
(BLAST)

001: MPMLRALNGI EFVSAESRYA LQYLAICSTI LIVWRPHAAL MNTLQIYDVT AYLDDHPGGA DVLLAVTGMD GTEEFEDAGH SKDAKELMKD YFIGELDLDE
101: TPDMPEMEVF RKEQDMDFAS KLVAYAAQYW AVPVAAVGIS AVVAILYARK K

Best Arabidopsis Sequence Match ( AT1G26340.1 )
(BLAST)

001: MPTLTKLYSM EEAATHNKQD DCWVVIDGKV YDVSSYMDEH PGGDDVLLAV AGKDATDDFE DAGHSKDARE LMEKYFIGEL DESSLPEIPE LKIYKKDQPQ
101: DSVQKLFDLT KQYWVVPVSI ITISVAVSVL FSRKT

Arabidopsis Description

CB5-ACB5-A [Source:UniProtKB/TrEMBL;Acc:A0A178WMK3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.