Factsheet for HORVU1Hr1G047990.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G081800.3
HORVU2Hr1G091830.4
HORVU5Hr1G071910.1
HORVU6Hr1G014450.1
HORVU6Hr1G060760.3
HORVU7Hr1G048940.3
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G53560.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT5G53560.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT5G53560.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT5G53560.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT5G53560.1	HORVU2Hr1G081800.3	AT4G26455.1	21798944
AT5G53560.1	HORVU5Hr1G071910.1	AT4G26455.1	21798944
AT5G53560.1	HORVU7Hr1G048940.3	AT4G26455.1	21798944
AT5G53560.1	HORVU6Hr1G014450.1	AT5G47120.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G184800.1	Wheat	cytosol	63.18	94.78
TraesCS1A01G181500.1	Wheat	cytosol, golgi	62.69	94.03
EER91363	Sorghum	cytosol	56.22	84.33
Os10t0518200-01	Rice	plasma membrane, plastid	42.29	81.73
TraesCS1B01G199300.1	Wheat	cytosol	80.1	75.94
Bra022660.1-P	Field mustard	cytosol	46.27	69.4
CDX96233	Canola	cytosol	46.27	69.4
VIT_16s0098g01230.t01	Wine grape	cytosol	46.27	69.4
CDY28830	Canola	cytosol	46.27	69.4
AT5G53560.1	Thale cress	cytosol	45.27	67.91
Zm00001d032442_P002	Maize	cytosol	46.77	67.63
PGSC0003DMT400047688	Potato	cytosol	44.78	67.16
PGSC0003DMT400013956	Potato	cytosol	44.78	67.16
KRH64355	Soybean	endoplasmic reticulum	46.27	66.43
GSMUA_Achr1P04070_001	Banana	cytosol	40.3	60.9
Zm00001d013839_P001	Maize	plasma membrane	54.73	60.44
CDY14370	Canola	cytosol	46.77	60.26
HORVU5Hr1G045040.1	Barley	cytosol, plasma membrane	37.31	55.97
GSMUA_Achr4P30410_001	Banana	cytosol, extracellular, mitochondrion	44.78	55.21
GSMUA_Achr11P...	Banana	cytosol	33.33	50.76
CDY20247	Canola	mitochondrion	46.77	49.47
KRH53581	Soybean	endoplasmic reticulum	47.76	49.23
Solyc03g082600.2.1	Tomato	plastid	45.77	48.42
HORVU3Hr1G114360.3	Barley	plasma membrane	41.29	47.98
GSMUA_Achr4P27140_001	Banana	cytosol	35.32	45.81
HORVU6Hr1G061420.4	Barley	cytosol	32.84	40.49
HORVU5Hr1G095930.3	Barley	endoplasmic reticulum	21.89	29.14
HORVU7Hr1G100040.1	Barley	plastid	27.36	27.23
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	14.93	25.42

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	UniProt:A0A287FFY4	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005783	GO:GO:0005886	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	GO:GO:0046872	EnsemblPlantsGene:HORVU1Hr1G047990
EnsemblPlants:HORVU1Hr1G047990.4	InterPro:IPR001199	InterPro:IPR036400	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191
PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF22	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix
UniParc:UPI000B462EA4	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:355335034..355337456

Molecular Weight (calculated)

21960.3 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.293

Length

201 amino acids

Sequence
(BLAST)

001: MGCGRGSNTA GSGATAHAER GRCPKRVIHF LRPRSVRATL RRPVPLAGDF SPSSRPPPGR ACCDLRAMAG DKKVFGFEEV ARHNVTKDCW LVIAGKVYDV
101: TSFMDEHPGG DEVLLAVTGK DATSDFEDIG HSDSAREMME KYHIGEIDAS TIPAKRTFVP PQQGSHVQAK DNDILIKILQ FLVPIFILGL AFGIRHYSKS
201: E

Best Arabidopsis Sequence Match ( AT5G53560.1 )
(BLAST)

001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD

Arabidopsis Description

CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.