Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- endoplasmic reticulum 1
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047688 | Potato | cytosol | 85.82 | 85.82 |
| KRH64355 | Soybean | endoplasmic reticulum | 87.31 | 83.57 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 82.84 | 82.84 |
| AT5G53560.1 | Thale cress | cytosol | 78.36 | 78.36 |
| Bra022660.1-P | Field mustard | cytosol | 76.12 | 76.12 |
| CDX96233 | Canola | cytosol | 76.12 | 76.12 |
| CDY28830 | Canola | cytosol | 76.12 | 76.12 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 55.97 | 72.12 |
| PGSC0003DMT400003091 | Potato | cytosol | 70.15 | 69.63 |
| EER91363 | Sorghum | cytosol | 69.4 | 69.4 |
| TraesCS1D01G184800.1 | Wheat | cytosol | 68.66 | 68.66 |
| PGSC0003DMT400051945 | Potato | cytosol | 67.16 | 68.18 |
| TraesCS1A01G181500.1 | Wheat | cytosol, golgi | 67.91 | 67.91 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 67.16 | 67.67 |
| PGSC0003DMT400045531 | Potato | cytosol | 66.42 | 66.92 |
| CDY14370 | Canola | cytosol | 76.12 | 65.38 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 75.37 | 61.96 |
| KRH53581 | Soybean | endoplasmic reticulum | 88.06 | 60.51 |
| PGSC0003DMT400000362 | Potato | cytosol | 56.72 | 57.58 |
| Zm00001d032442_P002 | Maize | cytosol | 59.7 | 57.55 |
| GSMUA_Achr11P... | Banana | cytosol | 55.97 | 56.82 |
| CDY20247 | Canola | mitochondrion | 76.12 | 53.68 |
| Zm00001d013839_P001 | Maize | plasma membrane | 70.15 | 51.65 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 52.99 | 45.81 |
| HORVU1Hr1G047990.4 | Barley | plastid | 67.16 | 44.78 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 67.91 | 42.92 |
| PGSC0003DMT400019916 | Potato | cytosol | 44.78 | 42.25 |
| PGSC0003DMT400072748 | Potato | cytosol | 38.81 | 39.1 |
| PGSC0003DMT400055458 | Potato | cytosol | 35.07 | 31.97 |
Protein Annotations
| EntrezGene:102581306 | MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 |
| GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | UniProt:M1A3J2 | PFAM:PF00173 | EnsemblPlantsGene:PGSC0003DMG400005465 |
| PGSC:PGSC0003DMG400005465 | EnsemblPlants:PGSC0003DMT400013956 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF22 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0002960EC1 | RefSeq:XP_006367355.1 |
| SEG:seg | : | : | : | : | : |
Description
Cytochrome b5 [Source:PGSC_GENE;Acc:PGSC0003DMG400005465]
Coordinates
chr6:+:38751543..38754843
Molecular Weight (calculated)
15112.0 Da
IEP (calculated)
5.198
GRAVY (calculated)
-0.372
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSDQKVHVF EEVAKHNKTK DCWLIISGKV YDVTPFMEDH PGGDEVLLSA TGKDATNDFE DVGHSDSARE MMDKYYIGDI DQSTVPLKRA YIPPQQAPYN
101: PDKTSEFVIK ILQILVPLLI LGLAFAVRHY TKEK
101: PDKTSEFVIK ILQILVPLLI LGLAFAVRHY TKEK
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Arabidopsis Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.