Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051945 | Potato | cytosol | 59.85 | 59.85 |
| PGSC0003DMT400047688 | Potato | cytosol | 60.61 | 59.7 |
| PGSC0003DMT400013956 | Potato | cytosol | 57.58 | 56.72 |
| PGSC0003DMT400003091 | Potato | cytosol | 57.58 | 56.3 |
| CDY47080 | Canola | cytosol | 56.82 | 55.97 |
| PGSC0003DMT400045531 | Potato | cytosol | 56.06 | 55.64 |
| Bra029062.1-P | Field mustard | nucleus | 39.39 | 44.07 |
| CDY47078 | Canola | nucleus | 39.39 | 44.07 |
| PGSC0003DMT400072748 | Potato | cytosol | 41.67 | 41.35 |
| PGSC0003DMT400019916 | Potato | cytosol | 38.64 | 35.92 |
| PGSC0003DMT400055458 | Potato | cytosol | 32.58 | 29.25 |
Protein Annotations
| EntrezGene:102594935 | MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 |
| GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | UniProt:M0ZGL7 | PFAM:PF00173 | EnsemblPlantsGene:PGSC0003DMG400000127 |
| PGSC:PGSC0003DMG400000127 | EnsemblPlants:PGSC0003DMT400000362 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 |
| PANTHER:PTHR19359:SF43 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000295E151 | RefSeq:XP_006339753.1 |
| SEG:seg | : | : | : | : | : |
Description
Cytochrome b5 isoform Cb5-A [Source:PGSC_GENE;Acc:PGSC0003DMG400000127]
Coordinates
chr1:+:73837908..73843905
Molecular Weight (calculated)
14617.2 Da
IEP (calculated)
4.605
GRAVY (calculated)
-0.253
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKLHAFSDL LEHNNKDDCW LLISGKVYDV TSFLDDHPGG DEVLLTATGK DATDDFEDVG HSDDAREMLK KYFIGEIDSS TIPAERKHTL PSSTTPSAGV
101: QGSGNSWKIL QFLLPLLILV AALAFRSFYQ KE
101: QGSGNSWKIL QFLLPLLILV AALAFRSFYQ KE
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Arabidopsis Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.