Factsheet for HORVU5Hr1G056140.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G185800.1	Wheat	endoplasmic reticulum, extracellular	95.76	95.76
TraesCS5B01G183900.1	Wheat	endoplasmic reticulum, extracellular	95.76	95.76
TraesCS5D01G190900.1	Wheat	endoplasmic reticulum, extracellular	95.76	95.76
EER98759	Sorghum	endoplasmic reticulum, extracellular	79.66	79.66
Os09t0334600-00	Rice	mitochondrion	58.47	78.41
Solyc12g008470.1.1	Tomato	mitochondrion	48.31	67.86
VIT_09s0002g03420.t01	Wine grape	cytosol	50.0	60.2
KRH74256	Soybean	endoplasmic reticulum, golgi	59.32	58.82
CDY24550	Canola	extracellular, golgi, vacuole	57.63	56.2
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	57.63	55.74
AT1G60660.1	Thale cress	endoplasmic reticulum	56.78	55.37
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	56.78	55.37
CDY46984	Canola	endoplasmic reticulum	56.78	50.76
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	61.02	49.32
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	61.02	47.06
CDY61511	Canola	endoplasmic reticulum, golgi	33.05	46.43
CDY44610	Canola	endoplasmic reticulum	32.2	45.24
Bra027144.1-P	Field mustard	nucleus	44.07	25.87
HORVU5Hr1G045040.1	Barley	cytosol, plasma membrane	27.97	24.63
HORVU6Hr1G061420.4	Barley	cytosol	27.97	20.25
HORVU5Hr1G095930.3	Barley	endoplasmic reticulum	20.34	15.89
HORVU3Hr1G114360.3	Barley	plasma membrane	22.88	15.61
HORVU7Hr1G100040.1	Barley	plastid	26.27	15.35
HORVU1Hr1G047990.4	Barley	plastid	25.42	14.93

Protein Annotations

Gene3D:3.10.120.10	MapMan:35.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	GO:GO:0003674
GO:GO:0005488	GO:GO:0020037	GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G056140	EnsemblPlants:HORVU5Hr1G056140.2	InterPro:IPR001199
InterPro:IPR036400	UniProt:M0WKX1	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255
PANTHER:PTHR19359	PANTHER:PTHR19359:SF63	SMART:SM01117	SUPFAM:SSF55856	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002958DDA	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:439201979..439204765

Molecular Weight (calculated)

12966.5 Da

IEP (calculated)

5.656

GRAVY (calculated)

-0.207

Length

118 amino acids

Sequence
(BLAST)

001: MEIIILISLV VLLVLGALIV IPRSKNKGEG KDARSGGNRT TSTSYTKKEV STHNTRKDCW IIIKDKVYDV TPYVEEHPGG DAILNNAGSD STEGFFGPQH
101: GTRVFDIIED FCIGKLED

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.