Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 3
- extracellular 3
- plastid 1
- vacuole 2
- plasma membrane 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24550 | Canola | extracellular, golgi, vacuole | 85.12 | 85.12 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 85.12 | 84.43 |
| Bra031489.1-P | Field mustard | extracellular, golgi, vacuole | 84.3 | 84.3 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 54.55 | 78.57 |
| CDY44610 | Canola | endoplasmic reticulum | 53.72 | 77.38 |
| CDY46984 | Canola | endoplasmic reticulum | 83.47 | 76.52 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 52.89 | 76.19 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 51.24 | 63.27 |
| Os09t0334600-00 | Rice | mitochondrion | 44.63 | 61.36 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 60.33 | 61.34 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 57.02 | 58.47 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 57.02 | 58.47 |
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 57.02 | 58.47 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 55.37 | 56.78 |
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 53.72 | 55.08 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 52.89 | 53.78 |
| OQU80382 | Sorghum | extracellular, vacuole | 52.07 | 53.39 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 50.41 | 51.69 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 60.33 | 47.71 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 52.89 | 43.84 |
| Bra027144.1-P | Field mustard | nucleus | 50.41 | 30.35 |
| AT1G26340.1 | Thale cress | cytosol | 29.75 | 26.67 |
| AT5G53560.1 | Thale cress | cytosol | 28.1 | 25.37 |
| AT2G32720.1 | Thale cress | cytosol | 27.27 | 24.63 |
| AT2G46650.1 | Thale cress | cytosol | 23.14 | 21.21 |
| AT5G48810.1 | Thale cress | cytosol | 23.97 | 20.71 |
Protein Annotations
| Gene3D:3.10.120.10 | MapMan:35.1 | EntrezGene:842360 | ProteinID:AAB71978.1 | ProteinID:AEE33716.1 | ArrayExpress:AT1G60660 |
| EnsemblPlantsGene:AT1G60660 | RefSeq:AT1G60660 | TAIR:AT1G60660 | RefSeq:AT1G60660-TAIR-G | EnsemblPlants:AT1G60660.1 | TAIR:AT1G60660.1 |
| EMBL:AY049297 | EMBL:AY133575 | Symbol:B5 #5 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 |
| GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | RefSeq:NP_176265.1 | UniProt:O22704 | PFAM:PF00173 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF65 | SMART:SM01117 |
| SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000009F610 | SEG:seg | : | : |
Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
Coordinates
chr1:-:22342290..22343269
Molecular Weight (calculated)
13710.2 Da
IEP (calculated)
5.568
GRAVY (calculated)
-0.397
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.